RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 PSMD9O00233 223 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 NKX2-8O15522 239 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 PLATP00750 562 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 ERBB2P04626 1255 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 PDHA1P08559 390 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 PPP3CBP16298 524 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 PNPLA4P41247 253 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 DRG2P55039 364 aaKnown RBP5.66□□□□□ -1.5
LINC00397-202ENST00000606785 BFSP2Q13515 415 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 LRRC24Q50LG9 513 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 ANKRD40Q6AI12 368 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 GRHL2Q6ISB3 625 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 ARMC6Q6NXE6 501 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 TMTC3Q6ZXV5 915 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.66□□□□□ -1.5
LINC00397-202ENST00000606785 NPIPB3Q92617 1050 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 GLG1Q92896 1179 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 WDYHV1Q96HA8 205 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 APOPT1Q96IL0 206 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 TIGD1Q96MW7 591 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 NUDT16L1Q9BRJ7 211 aaKnown RBP5.66□□□□□ -1.5
LINC00397-202ENST00000606785 SDF4Q9BRK5 362 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 SMYD2Q9NRG4 433 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 KRT84Q9NSB2 600 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 CNOT7Q9UIV1 285 aaKnown RBP5.66□□□□□ -1.5
LINC00397-202ENST00000606785 RAB21Q9UL25 225 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 TRPC5Q9UL62 973 aaPredicted RBP5.66□□□□□ -1.5
LINC00397-202ENST00000606785 RCE1Q9Y256 329 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 GDAQ9Y2T3 454 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 MAP3K2Q9Y2U5 619 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 TTLL3Q9Y4R7 772 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 PCDHA10Q9Y5I2 948 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 M0QZQ0 153 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 RNASET2O00584 256 aaKnown RBP5.65□□□□□ -1.5
LINC00397-202ENST00000606785 PEX12O00623 359 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 SLC16A3O15427 465 aaKnown RBP5.65□□□□□ -1.5
LINC00397-202ENST00000606785 TMCC2O75069 709 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 GUCY1B2O75343 617 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 F9P00740 461 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 CHN1P15882 459 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 ACO1P21399 889 aaKnown RBP5.65□□□□□ -1.5
LINC00397-202ENST00000606785 MMP8P22894 467 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 HIBADHP31937 336 aaKnown RBP5.65□□□□□ -1.5
LINC00397-202ENST00000606785 STAT1P42224 750 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 PAFAH1B1P43034 410 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 RAD52P43351 418 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 RPL15P61313 204 aaKnown RBP5.65□□□□□ -1.5
LINC00397-202ENST00000606785 RPP30P78346 268 aaKnown RBP5.65□□□□□ -1.5
LINC00397-202ENST00000606785 TBL3Q12788 808 aaKnown RBP5.65□□□□□ -1.5
LINC00397-202ENST00000606785 CRHR2Q13324 411 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 CCNG2Q16589 344 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 DENND1BQ6P3S1 775 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 H1FNTQ75WM6 255 aaPredicted RBP5.65□□□□□ -1.5
LINC00397-202ENST00000606785 B4GALNT4Q76KP1 1039 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 OR8H2Q8N162 312 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 B3GALNT2Q8NCR0 500 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 VPS50Q96JG6 964 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 PPP1R10Q96QC0 940 aaKnown RBP5.65□□□□□ -1.5
LINC00397-202ENST00000606785 DPCDQ9BVM2 203 aaPredicted RBP5.65□□□□□ -1.5
LINC00397-202ENST00000606785 PHF7Q9BWX1 381 aaPredicted RBP5.65□□□□□ -1.5
LINC00397-202ENST00000606785 IL21RQ9HBE5 538 aa5.65□□□□□ -1.5
LINC00397-202ENST00000606785 TBC1D3DA0A087WVF3 549 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 TBC1D3IA0A087WXS9 549 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 TBC1D3EA0A087X179 549 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 TBC1D3KA0A087X1G2 549 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 TBC1D3BA6NDS4 549 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 TBC1D3FA6NER0 549 aaPredicted RBP5.64□□□□□ -1.51
LINC00397-202ENST00000606785 AGAP5A6NIR3 686 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 PATE3B3GLJ2 98 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 TBC1D3LB9A6J9 549 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 ANP32CO43423 234 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 DOK2O60496 412 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 TIPRLO75663 272 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 NCR1O76036 304 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 CDKL5O76039 1030 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 TBC1D3HP0C7X1 549 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 MYCLP12524 364 aaPredicted RBP5.64□□□□□ -1.51
LINC00397-202ENST00000606785 ALADP13716 330 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 TNNT1P13805 278 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 GRK5P34947 590 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 LIPAP38571 399 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 PCP4P48539 62 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 HNRNPMP52272 730 aaKnown RBP eCLIP5.64□□□□□ -1.51
LINC00397-202ENST00000606785 FAM189BP81408 668 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 SETQ01105 290 aaPredicted RBP5.64□□□□□ -1.51
LINC00397-202ENST00000606785 ITIH3Q06033 890 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 RESTQ13127 1097 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 EIF2B5Q13144 721 aaKnown RBP5.64□□□□□ -1.51
LINC00397-202ENST00000606785 CAMK1Q14012 370 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 RRP1BQ14684 758 aaKnown RBP5.64□□□□□ -1.51
LINC00397-202ENST00000606785 NFIL3Q16649 462 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 PRICKLE4Q2TBC4 344 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 UBXN11Q5T124 520 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 TEDDM1Q5T9Z0 273 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 TBC1D3GQ6DHY5 549 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 TBC1D3CQ6IPX1 549 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 MAVSQ7Z434 540 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 P3H2Q8IVL5 708 aa5.64□□□□□ -1.51
LINC00397-202ENST00000606785 TBC1D3Q8IZP1 549 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms