RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 FMO1Q01740 532 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 GAB4Q2WGN9 574 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 SYPL2Q5VXT5 272 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 NAA35Q5VZE5 725 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 OLFML1Q6UWY5 402 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 DEFB106AQ8N104 65 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 CPA5Q8WXQ8 436 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 ATOH1Q92858 354 aaPredicted RBP18■□□□□ 0.47
SHKBP1-212ENST00000596163 SLC2A13Q96QE2 648 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 AGPAT1Q99943 283 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 NUCKS1Q9H1E3 243 aaKnown RBP18■□□□□ 0.47
SHKBP1-212ENST00000596163 ARHGEF4Q9NR80 690 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 STOML2Q9UJZ1 356 aa18■□□□□ 0.47
SHKBP1-212ENST00000596163 ZNF318Q5VUA4 2279 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 A0A0A0MRY4 1105 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 TULP3O75386 442 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 DAB1O75553 588 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 KAT7O95251 611 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 TRUB2O95900 331 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 IGLV3-27P01718 113 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 APOEP02649 317 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 SLC2A3P11169 496 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 TYRP14679 529 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 NOS2P35228 1153 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 TNFRSF4P43489 277 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 NSFP46459 744 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 MTA1Q13330 715 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 TAF5Q15542 800 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 ZNF528Q3MIS6 628 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 MPPE1Q53F39 396 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 ADGRF1Q5T601 910 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 SFMBT2Q5VUG0 894 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 GRAMD4Q6IC98 578 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 PPP1R2P3Q6NXS1 205 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 ETFBKMTQ8IXQ9 262 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 FAM217AQ8IXS0 508 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 NAT16Q8N8M0 369 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 BAP1Q92560 729 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 FAM204AQ9H8W3 233 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 SEPT11Q9NVA2 429 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 IFNKQ9P0W0 207 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 STAP1Q9ULZ2 295 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 COL4A3Q01955 1670 aa17.99■□□□□ 0.47
SHKBP1-212ENST00000596163 TBC1D3BA6NDS4 549 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 LRRC53A6NM62 1247 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 CHURC1-FNTBB4DL54 471 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 CACNG3O60359 315 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 RNF40O75150 1001 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 GRAP2O75791 330 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 TNFAIP3P21580 790 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 MATKP42679 507 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 CSTF1Q05048 431 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 ASIC2Q16515 512 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 FAM102AQ5T9C2 384 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 NAIF1Q69YI7 327 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 IRF2BP2Q7Z5L9 587 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 TAC4Q86UU9 113 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 XYLT1Q86Y38 959 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 DDI1Q8WTU0 396 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 RNF34Q969K3 372 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 ACDQ96AP0 544 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 SLC39A13Q96H72 371 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 FAM126AQ9BYI3 521 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 DNAJC17Q9NVM6 304 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 AIPL1Q9NZN9 384 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 KMT2EQ8IZD2 1858 aa17.98■□□□□ 0.47
SHKBP1-212ENST00000596163 A0A1W2PQJ5 194 aa17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 IRAK2O43187 625 aa17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 ACSL4O60488 711 aa17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 PENKP01210 267 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 CALB1P05937 261 aa17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 UNGP13051 313 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 MMP8P22894 467 aa17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 NRLP54845 237 aa17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 RNASE9P60153 205 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 MRPS21P82921 87 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 CLEC16AQ2KHT3 1053 aa17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 Q6ZS52 159 aa17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 ARCQ7LC44 396 aa17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 C12orf40Q86WS4 652 aa17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 ATP6V0D2Q8N8Y2 350 aa17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 ADAM32Q8TC27 787 aa17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 KCNV2Q8TDN2 545 aa17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 TMA16Q96EY4 203 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 PIWIL1Q96J94 861 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 FCRL2Q96LA5 508 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 SLC2A11Q9BYW1 496 aa17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 PRMT8Q9NR22 394 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 DDIT4Q9NX09 232 aa17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 PAXBP1Q9Y5B6 917 aa17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.97■□□□□ 0.47
SHKBP1-212ENST00000596163 TYW5A2RUC4 315 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 GOLGA8SH3BPF8 625 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 K7EQS6 105 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 PAPSS2O95340 614 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 F9P00740 461 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 IGLV3-25P01717 112 aa17.96■□□□□ 0.47
SHKBP1-212ENST00000596163 SP9P0CG40 484 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms