RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 PLD5Q8N7P1 536 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 RNF139Q8WU17 664 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 AUTS2Q8WXX7 1259 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 IFT81Q8WYA0 676 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMAD4-205ENST00000588745 CASP10Q92851 521 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 SERPINB11Q96P15 392 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 CSPG4P5Q96PW8 444 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 LBHD1Q9BQE6 289 aaPredicted RBP11.84□□□□□ -0.51
SMAD4-205ENST00000588745 TRIM31Q9BZY9 425 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 TMPRSS4Q9NRS4 437 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 OSER1Q9NX31 292 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 CLIC5Q9NZA1 410 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 FNIP2Q9P278 1114 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 FBXW11Q9UKB1 542 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 DRG1Q9Y295 367 aaKnown RBP11.84□□□□□ -0.51
SMAD4-205ENST00000588745 SSX2IPQ9Y2D8 614 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 YIPF1Q9Y548 306 aa11.84□□□□□ -0.51
SMAD4-205ENST00000588745 LCHNA4D1U4 455 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 H3BRJ5 948 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 I6L893 689 aaPredicted RBP11.83□□□□□ -0.52
SMAD4-205ENST00000588745 LILRB3O75022 631 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 ITGAVP06756 1048 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 ZDHHC11BP0C7U3 371 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 ZFXP17010 805 aaPredicted RBP11.83□□□□□ -0.52
SMAD4-205ENST00000588745 GOT1P17174 413 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 ZNF135P52742 658 aaPredicted RBP11.83□□□□□ -0.52
SMAD4-205ENST00000588745 DRG2P55039 364 aaKnown RBP11.83□□□□□ -0.52
SMAD4-205ENST00000588745 SEMA3BQ13214 749 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 HLTFQ14527 1009 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMAD4-205ENST00000588745 BRMS1LQ5PSV4 323 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 RASIP1Q5U651 963 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 DDX42Q86XP3 938 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMAD4-205ENST00000588745 ALLCQ8N6M5 410 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 KLHL23Q8NBE8 558 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 GIPC2Q8TF65 315 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 MAGEB5Q9BZ81 275 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 TKTL2Q9H0I9 626 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 WDCPQ9H6R7 721 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 PRDM16Q9HAZ2 1276 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 CYP4F11Q9HBI6 524 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 RXFP1Q9HBX9 757 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 ANLNQ9NQW6 1124 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 TLR8Q9NR97 1041 aaKnown RBP11.83□□□□□ -0.52
SMAD4-205ENST00000588745 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMAD4-205ENST00000588745 TMEM51Q9NW97 253 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 CWC15Q9P013 229 aaKnown RBP11.83□□□□□ -0.52
SMAD4-205ENST00000588745 SAE1Q9UBE0 346 aaPredicted RBP11.83□□□□□ -0.52
SMAD4-205ENST00000588745 ZNF148Q9UQR1 794 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 NEU2Q9Y3R4 380 aa11.83□□□□□ -0.52
SMAD4-205ENST00000588745 EEF2KO00418 725 aaKnown RBP11.82□□□□□ -0.52
SMAD4-205ENST00000588745 TEX28O15482 410 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 MSI1O43347 362 aaKnown RBP11.82□□□□□ -0.52
SMAD4-205ENST00000588745 RARGP13631 454 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 CTNNB1P35222 781 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 RPL21P46778 160 aaKnown RBP11.82□□□□□ -0.52
SMAD4-205ENST00000588745 EIF3EP60228 445 aaKnown RBP11.82□□□□□ -0.52
SMAD4-205ENST00000588745 NNTQ13423 1086 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 PPP2R5DQ14738 602 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 NCBP2-AS2Q69YL0 99 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 NPNTQ6UXI9 565 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 GSTA5Q7RTV2 222 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 PDZD8Q8NEN9 1154 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 CCHCR1Q8TD31 782 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 OVCA2Q8WZ82 227 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 P3H4Q92791 437 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 CAVIN3Q969G5 261 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 RNF34Q969K3 372 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 NEUROG2Q9H2A3 272 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 ARHGEF4Q9NR80 690 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 OLA1Q9NTK5 396 aaKnown RBP11.82□□□□□ -0.52
SMAD4-205ENST00000588745 ARHGEF38Q9NXL2 777 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 GRHL1Q9NZI5 618 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 ASIC3Q9UHC3 531 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 SFMBT1Q9UHJ3 866 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 NUDT5Q9UKK9 219 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 MAFFQ9ULX9 164 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 SNX24Q9Y343 169 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 RWDD3Q9Y3V2 267 aa11.82□□□□□ -0.52
SMAD4-205ENST00000588745 ATP8B1O43520 1251 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 CREB3O43889 395 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 KRT14P02533 472 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 CSH1P0DML2 217 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 CSH2P0DML3 217 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 RBP3P10745 1247 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 KLRC2P26717 231 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 CCR1P32246 355 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 ELF1P32519 619 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 CA8P35219 290 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 TNNT3P45378 269 aaPredicted RBP11.81□□□□□ -0.52
SMAD4-205ENST00000588745 DPYSQ14117 519 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 C1orf228Q6PIY5 440 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 RFX8Q6ZV50 586 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 MTERF4Q7Z6M4 381 aaKnown RBP11.81□□□□□ -0.52
SMAD4-205ENST00000588745 TCEAL8Q8IYN2 117 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 CCDC89Q8N998 374 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 SNF8Q96H20 258 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 EPAS1Q99814 870 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 TMEM121Q9BTD3 319 aa11.81□□□□□ -0.52
SMAD4-205ENST00000588745 FUT8Q9BYC5 575 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms