RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 STK33Q9BYT3 514 aa6.37□□□□□ -1.39
SMAD4-203ENST00000585448 ANKRD2Q9GZV1 360 aa6.37□□□□□ -1.39
SMAD4-203ENST00000585448 LSG1Q9H089 658 aaKnown RBP6.37□□□□□ -1.39
SMAD4-203ENST00000585448 DDX47Q9H0S4 455 aaKnown RBP6.37□□□□□ -1.39
SMAD4-203ENST00000585448 VPS33BQ9H267 617 aa6.37□□□□□ -1.39
SMAD4-203ENST00000585448 THAP9Q9H5L6 903 aa6.37□□□□□ -1.39
SMAD4-203ENST00000585448 PSTPIP2Q9H939 334 aa6.37□□□□□ -1.39
SMAD4-203ENST00000585448 TCP11L1Q9NUJ3 509 aa6.37□□□□□ -1.39
SMAD4-203ENST00000585448 SEPT11Q9NVA2 429 aaKnown RBP6.37□□□□□ -1.39
SMAD4-203ENST00000585448 INTS13Q9NVM9 706 aa6.37□□□□□ -1.39
SMAD4-203ENST00000585448 AIPL1Q9NZN9 384 aa6.37□□□□□ -1.39
SMAD4-203ENST00000585448 SELENONQ9NZV5 590 aa6.37□□□□□ -1.39
SMAD4-203ENST00000585448 DNAJB4Q9UDY4 337 aa6.37□□□□□ -1.39
SMAD4-203ENST00000585448 IP6K2Q9UHH9 426 aa6.37□□□□□ -1.39
SMAD4-203ENST00000585448 MAPRE3Q9UPY8 281 aa6.37□□□□□ -1.39
SMAD4-203ENST00000585448 APOBEC2Q9Y235 224 aaKnown RBP6.37□□□□□ -1.39
SMAD4-203ENST00000585448 CFL2Q9Y281 166 aa6.37□□□□□ -1.39
SMAD4-203ENST00000585448 DNAJC16Q9Y2G8 782 aa6.37□□□□□ -1.39
SMAD4-203ENST00000585448 STXBP5LQ9Y2K9 1186 aa6.37□□□□□ -1.39
SMAD4-203ENST00000585448 RABGAP1Q9Y3P9 1069 aa6.37□□□□□ -1.39
SMAD4-203ENST00000585448 ZFYVE9O95405 1425 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 ATP10DQ9P241 1426 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 PCDH11XQ9BZA7 1347 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 A0A087X0B3 334 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 GOLGA8QA0A0J9YX86 632 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 GOLGA8OA6NCC3 632 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 C2orf81A6NN90 581 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 GSG1L2A8MUP6 293 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 GOLGA8NF8WBI6 632 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 H0Y3Z8 333 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 GOLGA8RI6L899 631 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 TRAFD1O14545 582 aaPredicted RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 CPLX1O14810 134 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 XPO1O14980 1071 aaKnown RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 FYB1O15117 783 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 YKT6O15498 198 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 RNF113AO15541 343 aaKnown RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 SULT1B1O43704 296 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 MAFO75444 373 aaPredicted RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 RNASEH2AO75792 299 aaKnown RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 TOMM70O94826 608 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 KLHL2O95198 593 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 EYA4O95677 639 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 CHEK2O96017 543 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 ATP1A1P05023 1023 aaKnown RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 ABCB1P08183 1280 aaPredicted RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 ALAS1P13196 640 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 ZNF18P17022 549 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 CDH3P22223 829 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 ANXA13P27216 316 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 UBA7P41226 1012 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 NUP107P57740 925 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 POLR2FP61218 127 aaKnown RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 ATP6V0D1P61421 351 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 NAA20P61599 178 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 OLR1P78380 273 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 IRF9Q00978 393 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 C2orf54Q08AI8 447 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 ST3GAL1Q11201 340 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 CUL1Q13616 776 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 SF3B3Q15393 1217 aaKnown RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 SEC23AQ15436 765 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 PHKG1Q16816 387 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 KLHL38Q2WGJ6 581 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 CDONQ4KMG0 1287 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 TMEM63BQ5T3F8 832 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 RESP18Q5W5W9 173 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 EGFLAMQ63HQ2 1017 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 C4orf22Q6V702 233 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 MAEAQ7L5Y9 396 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 ELMOD1Q8N336 334 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 KIAA1958Q8N8K9 716 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 ANKRD53Q8N9V6 530 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 MARCH10Q8NA82 808 aaPredicted RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 CEP70Q8NHQ1 597 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 TLCD1Q96CP7 247 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 CFAP36Q96G28 342 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 EGLN2Q96KS0 407 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 NEUROD6Q96NK8 337 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 AIFM3Q96NN9 605 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 MTMR9Q96QG7 549 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 FNBP1Q96RU3 617 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 CIB1Q99828 191 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 ELAC2Q9BQ52 826 aaKnown RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 MRPL1Q9BYD6 325 aaKnown RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 XAB2Q9HCS7 855 aaKnown RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 MRGBPQ9NV56 204 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 RIC8BQ9NVN3 520 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 DDX56Q9NY93 547 aaKnown RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 STX18Q9P2W9 335 aaKnown RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 DBF4Q9UBU7 674 aaPredicted RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 VANGL2Q9ULK5 521 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 ZMYND8Q9ULU4 1186 aaPredicted RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 SNX12Q9UMY4 172 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 TRAF3IP3Q9Y228 551 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 ASB1Q9Y576 335 aa6.36□□□□□ -1.39
SMAD4-203ENST00000585448 EPN1Q9Y6I3 576 aaPredicted RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.36□□□□□ -1.39
SMAD4-203ENST00000585448 ARHGEF40Q8TER5 1519 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms