RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CCNL1Q9UK58 526 aaPredicted RBP5.87□□□□□ -1.47
SYNE2-210ENST00000553455 ADAMTS5Q9UNA0 930 aa5.87□□□□□ -1.47
SYNE2-210ENST00000553455 RCE1Q9Y256 329 aa5.87□□□□□ -1.47
SYNE2-210ENST00000553455 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 NPIPB8E9PQR5 432 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 SUV39H1O43463 412 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 TTLL1O95922 423 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 CNPP09543 421 aaKnown RBP5.86□□□□□ -1.47
SYNE2-210ENST00000553455 TMIGD3P0DMS9 266 aaPredicted RBP5.86□□□□□ -1.47
SYNE2-210ENST00000553455 PEPDP12955 493 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 MMP8P22894 467 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 IGHMBP2P38935 993 aaKnown RBP5.86□□□□□ -1.47
SYNE2-210ENST00000553455 AVPR1BP47901 424 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 RPL15P61313 204 aaKnown RBP5.86□□□□□ -1.47
SYNE2-210ENST00000553455 GPC5P78333 572 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 RAE1P78406 368 aaKnown RBP5.86□□□□□ -1.47
SYNE2-210ENST00000553455 TXNL4AP83876 142 aaKnown RBP5.86□□□□□ -1.47
SYNE2-210ENST00000553455 TAP1Q03518 808 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 PDCLQ13371 301 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 INTS11Q5TA45 600 aaKnown RBP5.86□□□□□ -1.47
SYNE2-210ENST00000553455 ANKRD40Q6AI12 368 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 LAIR1Q6GTX8 287 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 MTHFD1LQ6UB35 978 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 TMEM57Q8N5G2 664 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 LINC01465Q8N7H1 131 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 TEX19Q8NA77 164 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 ABHD11Q8NFV4 315 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 SLC2A12Q8TD20 617 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 EDC3Q96F86 508 aaKnown RBP5.86□□□□□ -1.47
SYNE2-210ENST00000553455 TRMT61AQ96FX7 289 aaKnown RBP5.86□□□□□ -1.47
SYNE2-210ENST00000553455 MAELQ96JY0 434 aaKnown RBP5.86□□□□□ -1.47
SYNE2-210ENST00000553455 PPM1MQ96MI6 270 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 CYP4F11Q9HBI6 524 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 WASH6PQ9NQA3 447 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 SNX15Q9NRS6 342 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 TMEM160Q9NX00 188 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 IFT80Q9P2H3 777 aaPredicted RBP5.86□□□□□ -1.47
SYNE2-210ENST00000553455 LRIT1Q9P2V4 623 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 RAB21Q9UL25 225 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 TRPC5Q9UL62 973 aaPredicted RBP5.86□□□□□ -1.47
SYNE2-210ENST00000553455 DERAQ9Y315 318 aa5.86□□□□□ -1.47
SYNE2-210ENST00000553455 CCDC151A5D8V7 595 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 HOXC11O43248 304 aaPredicted RBP5.85□□□□□ -1.47
SYNE2-210ENST00000553455 ZNF202O95125 648 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 PDE8BO95263 885 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 ADRB1P08588 477 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 NPSP0C0P6 89 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 MYCLP12524 364 aaPredicted RBP5.85□□□□□ -1.47
SYNE2-210ENST00000553455 NDUFB7P17568 137 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 MCM2P49736 904 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 EEFSECP57772 596 aaKnown RBP5.85□□□□□ -1.47
SYNE2-210ENST00000553455 FOXL2P58012 376 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 RBM6P78332 1123 aaKnown RBP5.85□□□□□ -1.47
SYNE2-210ENST00000553455 TLE2Q04725 743 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 DCTN1Q14203 1278 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 LCE1DQ5T752 114 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 L1TD1Q5T7N2 865 aaKnown RBP5.85□□□□□ -1.47
SYNE2-210ENST00000553455 MAP3K21Q5TCX8 1036 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 KIRREL2Q6UWL6 708 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 RINLQ6ZS11 566 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 BBS12Q6ZW61 710 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 ZNF627Q7L945 461 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 RASGRP2Q7LDG7 609 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 SFTPA1Q8IWL2 248 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 ESX1Q8N693 406 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 NAXEQ8NCW5 288 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 GLMPQ8WWB7 406 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 LARP4BQ92615 738 aaKnown RBP5.85□□□□□ -1.47
SYNE2-210ENST00000553455 CAVIN3Q969G5 261 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 KTI12Q96EK9 354 aaPredicted RBP5.85□□□□□ -1.47
SYNE2-210ENST00000553455 KAZALD1Q96I82 304 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 FAR2Q96K12 515 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 SNX18Q96RF0 628 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 ZNF341Q9BYN7 854 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 ARHGAP39Q9C0H5 1083 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 CDCP1Q9H5V8 836 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 PNMA2Q9UL42 364 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 DNAJC16Q9Y2G8 782 aa5.85□□□□□ -1.47
SYNE2-210ENST00000553455 MBD3L5A6NJ08 208 aaPredicted RBP5.84□□□□□ -1.47
SYNE2-210ENST00000553455 STX16-NPEPL1H3BU86 382 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 QSOX1O00391 747 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 STX16O14662 325 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 ZNF213O14771 459 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 MGST3O14880 152 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 ZNF37AP17032 561 aaPredicted RBP5.84□□□□□ -1.47
SYNE2-210ENST00000553455 KRT4P19013 534 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 DRD4P21917 467 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 GALNSP34059 522 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 CCT8P50990 548 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 RBM5P52756 815 aaKnown RBP eCLIP5.84□□□□□ -1.47
SYNE2-210ENST00000553455 UBE3AQ05086 875 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 RNASELQ05823 741 aaKnown RBP5.84□□□□□ -1.47
SYNE2-210ENST00000553455 CHRNDQ07001 517 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 TBX2Q13207 712 aaPredicted RBP5.84□□□□□ -1.47
SYNE2-210ENST00000553455 SLC12A1Q13621 1099 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 ZNF169Q14929 603 aaPredicted RBP5.84□□□□□ -1.47
SYNE2-210ENST00000553455 TBRG1Q3YBR2 411 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 AARS2Q5JTZ9 985 aaKnown RBP5.84□□□□□ -1.47
SYNE2-210ENST00000553455 ZNF484Q5JVG2 852 aa5.84□□□□□ -1.47
SYNE2-210ENST00000553455 ZNF569Q5MCW4 686 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms