RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 SPHK2Q9NRA0 654 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 DEC1Q9P2X7 70 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 SH3BP1Q9Y3L3 701 aa7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.23□□□□□ -1.25
PRPF40B-214ENST00000551320 APC2O95996 2303 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 ASXL3Q9C0F0 2248 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 KCNJ18B7U540 433 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 HHLA1C9JL84 531 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 MEN1O00255 615 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 KLRC4O43908 158 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 TLR5O60602 858 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 TSPAN3O60637 253 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 EIF5BO60841 1220 aaKnown RBP7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 TACC1O75410 805 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 ALDH1A2O94788 518 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 IL2RAP01589 272 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 KLKB1P03952 638 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 C4BPAP04003 597 aaKnown RBP7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 HLA-EP13747 358 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 CD59P13987 128 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 TYRP14679 529 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 TCF3P15923 654 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 ACO1P21399 889 aaKnown RBP7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 SCP2P22307 547 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 MRPS21P82921 87 aaKnown RBP7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 POU5F1Q01860 360 aaKnown RBP7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 GAD2Q05329 585 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 ZNF33AQ06730 810 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 PDE4CQ08493 712 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 GEN1Q17RS7 908 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 EOGTQ5NDL2 527 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 ERICH6BQ5W0A0 696 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 CEP135Q66GS9 1140 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 GRAMD4Q6IC98 578 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 SCD5Q86SK9 330 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 CHPFQ8IZ52 775 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 RGL4Q8IZJ4 473 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 TERB1Q8NA31 727 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 TSEN2Q8NCE0 465 aaKnown RBP7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 IPO4Q8TEX9 1081 aaKnown RBP7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 CRELD1Q96HD1 420 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 C7orf25Q9BPX7 421 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 BBS2Q9BXC9 721 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 NUSAP1Q9BXS6 441 aaKnown RBP7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 ELOVL4Q9GZR5 314 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 MIR1-1HGQ9H1L0 117 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 MTG2Q9H4K7 406 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 CAAP1Q9H8G2 361 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 UPF2Q9HAU5 1272 aaKnown RBP7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 APOBEC3GQ9HC16 384 aaKnown RBP7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 CD248Q9HCU0 757 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 POLMQ9NP87 494 aaPredicted RBP7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 ZMYM5Q9UJ78 669 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 PCDHA7Q9UN72 937 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 CEP192Q8TEP8 1941 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 MYH10P35580 1976 aa7.22□□□□□ -1.25
PRPF40B-214ENST00000551320 A0A1B0GVL5 298 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 E2F8A0AVK6 867 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 FAM149AA5PLN7 773 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 TULP2O00295 520 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 PIK3R2O00459 728 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 EIF3DO15371 548 aaKnown RBP eCLIP7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 HLA-DRAP01903 254 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 CISD3P0C7P0 127 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 RARGP13631 454 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 CEACAM1P13688 526 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 ABCD1P33897 745 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 TNFRSF4P43489 277 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 ASPAP45381 313 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 ME1P48163 572 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 GCLMP48507 274 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 ATXN3P54252 364 aaPredicted RBP7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 BNC1Q01954 994 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 DNM1Q05193 864 aaKnown RBP7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 PPP3CAQ08209 521 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 EHHADHQ08426 723 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 EFEMP1Q12805 493 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 SEMA3BQ13214 749 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 CLN3Q13286 438 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 ALCAMQ13740 583 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 LAPTM4AQ15012 233 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 MAPRE1Q15691 268 aaKnown RBP7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 SWI5Q1ZZU3 235 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 PLEKHG6Q3KR16 790 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 FUT11Q495W5 492 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 ZNF667Q5HYK9 610 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 C10orf120Q5SQS8 335 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 PRAMEF14Q5SWL7 426 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 BTBD8Q5XKL5 378 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 CLEC20AQ6ZU45 233 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 UNC13DQ70J99 1090 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 SV2AQ7L0J3 742 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 PIP4P1Q86T03 277 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 SLCO6A1Q86UG4 719 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 LINC00528Q8N1L1 170 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 ZCCHC9Q8N567 271 aaKnown RBP7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 MDM1Q8TC05 714 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 PARD3BQ8TEW8 1205 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 SPACA7Q96KW9 195 aa7.21□□□□□ -1.26
PRPF40B-214ENST00000551320 MRGPRX1Q96LB2 322 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms