RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 NR1H4Q96RI1 486 aaPredicted RBP11.89□□□□□ -0.51
DDB1-224ENST00000545894 TCHPQ9BT92 498 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 MECRQ9BV79 373 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 FRMD8Q9BZ67 464 aaPredicted RBP11.89□□□□□ -0.51
DDB1-224ENST00000545894 SPC25Q9HBM1 224 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 DDX43Q9NXZ2 648 aaKnown RBP11.89□□□□□ -0.51
DDB1-224ENST00000545894 SIRPGQ9P1W8 387 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 PDP2Q9P2J9 529 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 USP18Q9UMW8 372 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 PLA2G4CQ9UP65 541 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 LGR5O75473 907 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 TOM1L1O75674 476 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 ATP5BP06576 529 aaKnown RBP11.88□□□□□ -0.51
DDB1-224ENST00000545894 ANPEPP15144 967 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 CCNFP41002 786 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 CPT1AP50416 773 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 YWHAZP63104 245 aaKnown RBP11.88□□□□□ -0.51
DDB1-224ENST00000545894 ACAP1Q15027 740 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 SURF1Q15526 300 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 TBCCQ15814 346 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 DGKDQ16760 1214 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 NBPF20Q3BBV1 942 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 GNASQ5JWF2 1037 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 NPNTQ6UXI9 565 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 RIPOR1Q6ZS17 1223 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 XYLT1Q86Y38 959 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 CEP120Q8N960 986 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 PHC3Q8NDX5 983 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 FBXO27Q8NI29 283 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 CPXM1Q96SM3 734 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 NIFKQ9BYG3 293 aaKnown RBP11.88□□□□□ -0.51
DDB1-224ENST00000545894 RAB6BQ9NRW1 208 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 MKS1Q9NXB0 559 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 PAK5Q9P286 719 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 ZC3H7BQ9UGR2 993 aaKnown RBP11.88□□□□□ -0.51
DDB1-224ENST00000545894 DOCK5Q9H7D0 1870 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 TTLL13PA6NNM8 815 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 TRDMT1O14717 391 aaKnown RBP11.88□□□□□ -0.51
DDB1-224ENST00000545894 ERBB2P04626 1255 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 MYL3P08590 195 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 ACTR3P61158 418 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 AP2B1P63010 937 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 MRPS5P82675 430 aaKnown RBP11.88□□□□□ -0.51
DDB1-224ENST00000545894 TFAMQ00059 246 aaKnown RBP11.88□□□□□ -0.51
DDB1-224ENST00000545894 CHI3L2Q15782 390 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 KCNA10Q16322 511 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 TEX44Q53QW1 395 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 MDH1BQ5I0G3 518 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 FOXB2Q5VYV0 432 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 TRIM50Q86XT4 487 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 MYLK4Q86YV6 388 aaPredicted RBP11.88□□□□□ -0.51
DDB1-224ENST00000545894 CRLF3Q8IUI8 442 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 NUDCD3Q8IVD9 361 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 ULK2Q8IYT8 1036 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 PANX3Q96QZ0 392 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 MRPL4Q9BYD3 311 aaKnown RBP11.88□□□□□ -0.51
DDB1-224ENST00000545894 FAM192AQ9GZU8 254 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 XYLT2Q9H1B5 865 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 CPSF2Q9P2I0 782 aaKnown RBP11.88□□□□□ -0.51
DDB1-224ENST00000545894 DNAJB4Q9UDY4 337 aa11.88□□□□□ -0.51
DDB1-224ENST00000545894 CXorf49A8MYA2 514 aaPredicted RBP11.87□□□□□ -0.51
DDB1-224ENST00000545894 H7C0C1 242 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 OGTO15294 1046 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 RFPL1O75677 317 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 LGALS2P05162 132 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 GJB1P08034 283 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 ZNF286BP0CG31 522 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 PRKCHP24723 683 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 CST5P28325 142 aaPredicted RBP11.87□□□□□ -0.51
DDB1-224ENST00000545894 ATP5OP48047 213 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 AQP5P55064 265 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 DSG1Q02413 1049 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 KDSRQ06136 332 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 MMRN1Q13201 1228 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 TFDP2Q14188 446 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 FAM47CQ5HY64 1035 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 RNF180Q86T96 592 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 SLC4A11Q8NBS3 891 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 RAB3IL1Q8TBN0 382 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 C16orf70Q9BSU1 422 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 THTPAQ9BU02 230 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 POPDC2Q9HBU9 364 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 ASNSD1Q9NWL6 643 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 NDE1Q9NXR1 346 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 NXF1Q9UBU9 619 aaKnown RBP11.87□□□□□ -0.51
DDB1-224ENST00000545894 OGDHLQ9ULD0 1010 aa11.87□□□□□ -0.51
DDB1-224ENST00000545894 CCDC195A0A1B0GUA6 201 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 KRT38O76015 456 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 ENDOD1O94919 500 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 RAB27AP51159 221 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 STAT5BP51692 787 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 EFNA5P52803 228 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 CDH6P55285 790 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 PURAQ00577 322 aaKnown RBP11.86□□□□□ -0.51
DDB1-224ENST00000545894 CES4AQ5XG92 561 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 IZUMO2Q6UXV1 221 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 MTBPQ96DY7 904 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 GBP5Q96PP8 586 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 ECSITQ9BQ95 431 aa11.86□□□□□ -0.51
DDB1-224ENST00000545894 CCDC106Q9BWC9 280 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms