RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 FBXO47Q5MNV8 452 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 HFE2Q6ZVN8 426 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 SEPT10Q9P0V9 454 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 SMG5Q9UPR3 1016 aaKnown RBP15.29■□□□□ 0.04
DDX55-209ENST00000542286 TTLL3Q9Y4R7 772 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 RBM47A0AV96 593 aaKnown RBP15.29■□□□□ 0.04
DDX55-209ENST00000542286 KPNA7A9QM74 516 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 INHBAP08476 426 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 TPBGLP0DKB5 382 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 CSH1P0DML2 217 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 CSH2P0DML3 217 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 NR1H3Q13133 447 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 NME3Q13232 169 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 CES3Q6UWW8 571 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 MTDHQ86UE4 582 aaKnown RBP15.29■□□□□ 0.04
DDX55-209ENST00000542286 BEST2Q8NFU1 509 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 STK32AQ8WU08 396 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 CYTH2Q99418 400 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 IKBKGQ9Y6K9 419 aa15.29■□□□□ 0.04
DDX55-209ENST00000542286 PEX11AO75192 247 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 MYL3P08590 195 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 DARSP14868 501 aaKnown RBP15.28■□□□□ 0.04
DDX55-209ENST00000542286 VAV1P15498 845 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 STIP1P31948 543 aaKnown RBP15.28■□□□□ 0.04
DDX55-209ENST00000542286 GTF2A2P52657 109 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 PDCD2Q16342 344 aaPredicted RBP15.28■□□□□ 0.04
DDX55-209ENST00000542286 DCAF6Q58WW2 860 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 SYPL2Q5VXT5 272 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 CES4AQ5XG92 561 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 NOTUMQ6P988 496 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 TMEM154Q6P9G4 183 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 CEP128Q6ZU80 1094 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 ZNF534Q76KX8 674 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 MAP7D3Q8IWC1 876 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 DEFB106AQ8N104 65 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 RNF169Q8NCN4 708 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 C10orf82Q8WW14 230 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 POPDC2Q9HBU9 364 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 FBXO6Q9NRD1 293 aaPredicted RBP15.28■□□□□ 0.04
DDX55-209ENST00000542286 CREB3O43889 395 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 C1QAP02745 245 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 RARBP10826 455 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 GRB14Q14449 540 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 KLHL38Q2WGJ6 581 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 BOLA3Q53S33 107 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 TAF1BQ53T94 588 aaPredicted RBP15.28■□□□□ 0.04
DDX55-209ENST00000542286 MROH9Q5TGP6 573 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 PIGZQ86VD9 579 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 CSPG4P5Q96PW8 444 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 RHOBTB2Q9BYZ6 727 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 ABHD16BQ9H3Z7 469 aa15.28■□□□□ 0.04
DDX55-209ENST00000542286 ZSWIM8A7E2V4 1837 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 A6NJR5 290 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 E7ENQ6 273 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 GM2AP17900 193 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 CYP2B6P20813 491 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 LBRQ14739 615 aaKnown RBP15.27■□□□□ 0.04
DDX55-209ENST00000542286 SNX17Q15036 470 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 RNF43Q68DV7 783 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 SLC9A4Q6AI14 798 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 UNC5AQ6ZN44 842 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 LPPQ93052 612 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 EMID1Q96A84 441 aaPredicted RBP15.27■□□□□ 0.04
DDX55-209ENST00000542286 LRRC37BQ96QE4 947 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 NUDCD1Q96RS6 583 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 TXLNGQ9NUQ3 528 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 DTLQ9NZJ0 730 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 MARCOQ9UEW3 520 aaPredicted RBP15.27■□□□□ 0.04
DDX55-209ENST00000542286 STARD13Q9Y3M8 1113 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 ASB3Q9Y575 518 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 SNX10Q9Y5X0 201 aa15.27■□□□□ 0.04
DDX55-209ENST00000542286 T-ENOLP0DO92 83 aa15.27■□□□□ 0.03
DDX55-209ENST00000542286 KLC1Q07866 573 aa15.27■□□□□ 0.03
DDX55-209ENST00000542286 ACAP1Q15027 740 aa15.27■□□□□ 0.03
DDX55-209ENST00000542286 PARP6Q2NL67 630 aa15.27■□□□□ 0.03
DDX55-209ENST00000542286 PAN2Q504Q3 1202 aaKnown RBP15.27■□□□□ 0.03
DDX55-209ENST00000542286 FAM47CQ5HY64 1035 aa15.27■□□□□ 0.03
DDX55-209ENST00000542286 KIAA0319Q5VV43 1072 aa15.27■□□□□ 0.03
DDX55-209ENST00000542286 PLEKHH3Q7Z736 793 aa15.27■□□□□ 0.03
DDX55-209ENST00000542286 TTC7BQ86TV6 843 aa15.27■□□□□ 0.03
DDX55-209ENST00000542286 ZNF410Q86VK4 478 aa15.27■□□□□ 0.03
DDX55-209ENST00000542286 DEPDC1BQ8WUY9 529 aa15.27■□□□□ 0.03
DDX55-209ENST00000542286 SLC44A1Q8WWI5 657 aa15.27■□□□□ 0.03
DDX55-209ENST00000542286 UPF1Q92900 1129 aaKnown RBP eCLIP15.27■□□□□ 0.03
DDX55-209ENST00000542286 SNX25Q9H3E2 840 aa15.27■□□□□ 0.03
DDX55-209ENST00000542286 NUP205Q92621 2012 aa15.27■□□□□ 0.03
DDX55-209ENST00000542286 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.26■□□□□ 0.03
DDX55-209ENST00000542286 SLC15A5A6NIM6 579 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 H0Y3Z8 333 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 I3L4J1 428 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 MFSD11O43934 449 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 CTSHP09668 335 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 KITP10721 976 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 ERFP50548 548 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 SESN2P58004 480 aaPredicted RBP15.26■□□□□ 0.03
DDX55-209ENST00000542286 DCAF4L1Q3SXM0 396 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 UBXN11Q5T124 520 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 CASC4Q6P4E1 433 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 ALKAL1Q6UXT8 129 aa15.26■□□□□ 0.03
DDX55-209ENST00000542286 NLRP9Q7RTR0 991 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms