RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 CD4P01730 458 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 RGS2P41220 211 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 SERPINB4P48594 390 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 ROR1Q01973 937 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 MSS51Q4VC12 460 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 FAM47CQ5HY64 1035 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 FNBP1LQ5T0N5 605 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 PPP1R21Q6ZMI0 780 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 STKLD1Q8NE28 680 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 APPL2Q8NEU8 664 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 HAPLN3Q96S86 360 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 SNRNP25Q9BV90 132 aaKnown RBP11.97□□□□□ -0.49
USP35-207ENST00000530546 PITPNM3Q9BZ71 974 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 PPP1R12CQ9BZL4 782 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 FOXP3Q9BZS1 431 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 CIDEBQ9UHD4 219 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 TRIP12Q14669 1992 aaPredicted RBP11.97□□□□□ -0.49
USP35-207ENST00000530546 HAS3O00219 553 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 CLDN5O00501 218 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 PIRO00625 290 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 CDH16O75309 829 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 TARSP26639 723 aaKnown RBP11.97□□□□□ -0.49
USP35-207ENST00000530546 SSTR1P30872 391 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 TAF6P49848 677 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 MPP2Q14168 576 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 DBN1Q16643 649 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 SH2D4BQ5SQS7 431 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 SNX30Q5VWJ9 437 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 TMEM110Q86TL2 294 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 PPIL6Q8IXY8 311 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 SMG8Q8ND04 991 aaKnown RBP11.97□□□□□ -0.49
USP35-207ENST00000530546 SLC7A6OSQ96CW6 309 aaPredicted RBP11.97□□□□□ -0.49
USP35-207ENST00000530546 XPO7Q9UIA9 1087 aaKnown RBP11.97□□□□□ -0.49
USP35-207ENST00000530546 HAO1Q9UJM8 370 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 SHOC2Q9UQ13 582 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 SYNJ2BP-COX16A0A087WUM0 186 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 RASA4BC9J798 803 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 RASA4O43374 803 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 HUS1O60921 280 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 SPAG7O75391 227 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 TMEM63AO94886 807 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 AXLP30530 894 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 RABGGTBP53611 331 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 CRYBB1P53674 252 aaPredicted RBP11.97□□□□□ -0.49
USP35-207ENST00000530546 GNASQ5JWF2 1037 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 FAXCQ5TGI0 409 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 CXCL17Q6UXB2 119 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 CEP128Q6ZU80 1094 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 UNC93AQ86WB7 457 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 MAP7D3Q8IWC1 876 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 ADGRF2Q8IZF7 708 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 PPFIBP2Q8ND30 876 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 TTC8Q8TAM2 541 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 PYROXD1Q8WU10 500 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 SCG3Q8WXD2 468 aaKnown RBP11.97□□□□□ -0.49
USP35-207ENST00000530546 ZNF560Q96MR9 790 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 RNF157Q96PX1 679 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 SPATA16Q9BXB7 569 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 DHX35Q9H5Z1 703 aaKnown RBP11.97□□□□□ -0.49
USP35-207ENST00000530546 PCDH18Q9HCL0 1135 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 GALNT8Q9NY28 637 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 NKIRAS1Q9NYS0 192 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 COX16Q9P0S2 106 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 LNPEPQ9UIQ6 1025 aa11.97□□□□□ -0.49
USP35-207ENST00000530546 MANSC4A6NHS7 340 aaPredicted RBP11.96□□□□□ -0.49
USP35-207ENST00000530546 ENTPD5O75356 428 aa11.96□□□□□ -0.49
USP35-207ENST00000530546 PGK1P00558 417 aa11.96□□□□□ -0.49
USP35-207ENST00000530546 PTPN4P29074 926 aa11.96□□□□□ -0.49
USP35-207ENST00000530546 EPHB2P29323 1055 aa11.96□□□□□ -0.49
USP35-207ENST00000530546 TKTP29401 623 aaKnown RBP11.96□□□□□ -0.49
USP35-207ENST00000530546 HDAC4P56524 1084 aa11.96□□□□□ -0.49
USP35-207ENST00000530546 ARL4CP56559 192 aa11.96□□□□□ -0.49
USP35-207ENST00000530546 BCAR1P56945 870 aa11.96□□□□□ -0.49
USP35-207ENST00000530546 RNASELQ05823 741 aaKnown RBP11.96□□□□□ -0.49
USP35-207ENST00000530546 BST2Q10589 180 aaKnown RBP11.96□□□□□ -0.49
USP35-207ENST00000530546 TFDP2Q14188 446 aa11.96□□□□□ -0.49
USP35-207ENST00000530546 CNPY1Q3B7I2 92 aa11.96□□□□□ -0.49
USP35-207ENST00000530546 RASIP1Q5U651 963 aa11.96□□□□□ -0.49
USP35-207ENST00000530546 C17orf99Q6UX52 265 aa11.96□□□□□ -0.49
USP35-207ENST00000530546 OSTM1Q86WC4 334 aa11.96□□□□□ -0.49
USP35-207ENST00000530546 RELL1Q8IUW5 271 aa11.96□□□□□ -0.49
USP35-207ENST00000530546 FAM149B1Q96BN6 582 aa11.96□□□□□ -0.49
USP35-207ENST00000530546 IL1RAPL1Q9NZN1 696 aa11.96□□□□□ -0.49
USP35-207ENST00000530546 FARP1Q9Y4F1 1045 aaPredicted RBP11.96□□□□□ -0.49
USP35-207ENST00000530546 ALOX15BO15296 676 aa11.96□□□□□ -0.5
USP35-207ENST00000530546 KCNN4O15554 427 aa11.96□□□□□ -0.5
USP35-207ENST00000530546 XPOTO43592 962 aaKnown RBP11.96□□□□□ -0.5
USP35-207ENST00000530546 DESP17661 470 aa11.96□□□□□ -0.5
USP35-207ENST00000530546 KRT15P19012 456 aa11.96□□□□□ -0.5
USP35-207ENST00000530546 BCAT1P54687 386 aa11.96□□□□□ -0.5
USP35-207ENST00000530546 PURAQ00577 322 aaKnown RBP11.96□□□□□ -0.5
USP35-207ENST00000530546 EFTUD2Q15029 972 aaKnown RBP eCLIP11.96□□□□□ -0.5
USP35-207ENST00000530546 NOMO1Q15155 1222 aa11.96□□□□□ -0.5
USP35-207ENST00000530546 PCGF5Q86SE9 256 aa11.96□□□□□ -0.5
USP35-207ENST00000530546 PLD5Q8N7P1 536 aa11.96□□□□□ -0.5
USP35-207ENST00000530546 NAT8LQ8N9F0 302 aa11.96□□□□□ -0.5
USP35-207ENST00000530546 ANKRD52Q8NB46 1076 aa11.96□□□□□ -0.5
USP35-207ENST00000530546 PCDH19Q8TAB3 1148 aa11.96□□□□□ -0.5
USP35-207ENST00000530546 TTC25Q96NG3 672 aa11.96□□□□□ -0.5
USP35-207ENST00000530546 CENPKQ9BS16 269 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms