RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 C6orf118Q5T5N4 469 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 TTC22Q5TAA0 569 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 GPR139Q6DWJ6 353 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 TMEM154Q6P9G4 183 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 MACC1Q6ZN28 852 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 SLC22A9Q8IVM8 553 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 MB21D2Q8IYB1 491 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-216ENST00000523088 DIS3L2Q8IYB7 885 aaKnown RBP7.79□□□□□ -1.16
HDAC3-216ENST00000523088 PM20D2Q8IYS1 436 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 LRRC34Q8IZ02 419 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 KIAA0319LQ8IZA0 1049 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 ANKS4BQ8N8V4 417 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 PNMA1Q8ND90 353 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 ST13P5Q8NFI4 369 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-216ENST00000523088 EXD1Q8NHP7 514 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 CCDC127Q96BQ5 260 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 CNOT6LQ96LI5 555 aaKnown RBP7.79□□□□□ -1.16
HDAC3-216ENST00000523088 USP28Q96RU2 1077 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 CTRCQ99895 268 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 BCL7BQ9BQE9 202 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 PSD2Q9BQI7 771 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 LLPHQ9BRT6 129 aaKnown RBP7.79□□□□□ -1.16
HDAC3-216ENST00000523088 TIPINQ9BVW5 301 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 RHOBTB2Q9BYZ6 727 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 IMPG2Q9BZV3 1241 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 THAP9Q9H5L6 903 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 PDLIM7Q9NR12 457 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 NSMCE4AQ9NXX6 385 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 SNTG2Q9NY99 539 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 HSPBP1Q9NZL4 362 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 COX16Q9P0S2 106 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 EIF2B4Q9UI10 523 aaKnown RBP7.79□□□□□ -1.16
HDAC3-216ENST00000523088 RWDD3Q9Y3V2 267 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 L3MBTL1Q9Y468 752 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 ABCB11O95342 1321 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 TEX51A0A1B0GUA7 166 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 TYW5A2RUC4 315 aaKnown RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 LRRN2O75325 713 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 ATP6V1G2O95670 118 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 HSPA4LO95757 839 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 CYP1A1P04798 512 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 APOA4P06727 396 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 VAV1P15498 845 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 ITGA2P17301 1181 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 GAP43P17677 238 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 KELP23276 732 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 LRPAP1P30533 357 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 GSTT1P30711 240 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 HOXA11P31270 313 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 SOX5P35711 763 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 GARSP41250 739 aaKnown RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 GSK3AP49840 483 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 CPT1AP50416 773 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 ALDH5A1P51649 535 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 CCR3P51677 355 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 STX17P56962 302 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 PSMC5P62195 406 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 RELAQ04206 551 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 TLE2Q04725 743 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 ZNF33BQ06732 778 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 DHX9Q08211 1270 aaKnown RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 MYO1EQ12965 1108 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 GALNT3Q14435 633 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 KRT32Q14532 448 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 RFTN1Q14699 578 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 KCNAB1Q14722 419 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 KCNA10Q16322 511 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 UGP2Q16851 508 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 PLA2G4EQ3MJ16 856 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 SLC39A12Q504Y0 691 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 GNASQ5JWF2 1037 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 IFIT1BQ5T764 474 aaKnown RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 DUS1LQ6P1R4 473 aaKnown RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 SHQ1Q6PI26 577 aaKnown RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 NSMFQ6X4W1 530 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 Q6ZNX1 250 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 RNF207Q6ZRF8 634 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 ENOSF1Q7L5Y1 443 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 VASH1Q7L8A9 365 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 TRPM8Q7Z2W7 1104 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 KCTD20Q7Z5Y7 419 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 TLK2Q86UE8 772 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 TBC1D10CQ8IV04 446 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 NOSTRINQ8IVI9 506 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 C17orf53Q8N3J3 647 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 RNF169Q8NCN4 708 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 ZBTB44Q8NCP5 570 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 ZNF461Q8TAF7 563 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 PTCD2Q8WV60 388 aaKnown RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 CPLX3Q8WVH0 158 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 RAB7BQ96AH8 199 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 SLC22A18Q96BI1 424 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 SGF29Q96ES7 293 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 RMND5BQ96G75 393 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 ZNF570Q96NI8 536 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 ZSCAN10Q96SZ4 725 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 BARD1Q99728 777 aaKnown RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 FAM126AQ9BYI3 521 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-216ENST00000523088 ACPTQ9BZG2 426 aa7.78□□□□□ -1.16
HDAC3-216ENST00000523088 MTIF3Q9H2K0 278 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms