RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 LRRC8DQ7L1W4 858 aa18.97■□□□□ 0.63
SDC2-202ENST00000518385 CMASQ8NFW8 434 aaPredicted RBP18.97■□□□□ 0.63
SDC2-202ENST00000518385 ZNF483Q8TF39 744 aaPredicted RBP18.97■□□□□ 0.63
SDC2-202ENST00000518385 KBTBD7Q8WVZ9 684 aa18.97■□□□□ 0.63
SDC2-202ENST00000518385 HERPUD2Q9BSE4 406 aa18.97■□□□□ 0.63
SDC2-202ENST00000518385 BTBD10Q9BSF8 475 aa18.97■□□□□ 0.63
SDC2-202ENST00000518385 HEMGNQ9BXL5 484 aa18.97■□□□□ 0.63
SDC2-202ENST00000518385 TRIM33Q9UPN9 1127 aa18.97■□□□□ 0.63
SDC2-202ENST00000518385 C2CD4BA6NLJ0 364 aa18.96■□□□□ 0.63
SDC2-202ENST00000518385 TARSP26639 723 aaKnown RBP18.96■□□□□ 0.63
SDC2-202ENST00000518385 GJC1P36383 396 aa18.96■□□□□ 0.63
SDC2-202ENST00000518385 ARSEP51690 589 aa18.96■□□□□ 0.63
SDC2-202ENST00000518385 ATN1P54259 1190 aaPredicted RBP18.96■□□□□ 0.63
SDC2-202ENST00000518385 LILRA4P59901 499 aa18.96■□□□□ 0.63
SDC2-202ENST00000518385 SLC6A3Q01959 620 aa18.96■□□□□ 0.63
SDC2-202ENST00000518385 GSTA3Q16772 222 aa18.96■□□□□ 0.63
SDC2-202ENST00000518385 DAB2IPQ5VWQ8 1189 aa18.96■□□□□ 0.63
SDC2-202ENST00000518385 MFN1Q8IWA4 741 aa18.96■□□□□ 0.63
SDC2-202ENST00000518385 C12orf29Q8N999 325 aa18.96■□□□□ 0.63
SDC2-202ENST00000518385 HSFY1Q96LI6 401 aa18.96■□□□□ 0.63
SDC2-202ENST00000518385 TOX2Q96NM4 488 aa18.96■□□□□ 0.63
SDC2-202ENST00000518385 TRAPPC9Q96Q05 1148 aa18.96■□□□□ 0.63
SDC2-202ENST00000518385 VPS37BQ9H9H4 285 aa18.96■□□□□ 0.63
SDC2-202ENST00000518385 TJP2Q9UDY2 1190 aa18.96■□□□□ 0.63
SDC2-202ENST00000518385 ZNF148Q9UQR1 794 aa18.96■□□□□ 0.63
SDC2-202ENST00000518385 E5RJQ4 531 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 E7ESA3 106 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 PITPNM1O00562 1244 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 PTGESO14684 152 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 KLF11O14901 512 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 NVLO15381 856 aaKnown RBP18.95■□□□□ 0.62
SDC2-202ENST00000518385 PQBP1O60828 265 aaKnown RBP18.95■□□□□ 0.62
SDC2-202ENST00000518385 HAUS5O94927 633 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 RPL9P32969 192 aaKnown RBP18.95■□□□□ 0.62
SDC2-202ENST00000518385 ABL2P42684 1182 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 SF3A3Q12874 501 aaKnown RBP eCLIP18.95■□□□□ 0.62
SDC2-202ENST00000518385 OASLQ15646 514 aaKnown RBP18.95■□□□□ 0.62
SDC2-202ENST00000518385 ATP13A4Q4VNC1 1196 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 ANO7Q6IWH7 933 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 LVRNQ6Q4G3 990 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 C4orf50Q6ZRC1 276 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 FAM183BPQ6ZVS7 135 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 OTOAQ7RTW8 1153 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 CLNKQ7Z7G1 428 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 TTC30AQ86WT1 665 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 PPIL6Q8IXY8 311 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 TMEM86AQ8N2M4 240 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 PPFIBP2Q8ND30 876 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 NSL1Q96IY1 281 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 ADAM2Q99965 735 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 FRMD8Q9BZ67 464 aaPredicted RBP18.95■□□□□ 0.62
SDC2-202ENST00000518385 ACSS3Q9H6R3 686 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 ZNF212Q9UDV6 495 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 DNAJB4Q9UDY4 337 aa18.95■□□□□ 0.62
SDC2-202ENST00000518385 ZMYND8Q9ULU4 1186 aaPredicted RBP18.95■□□□□ 0.62
SDC2-202ENST00000518385 A0A0U1RQF3 1178 aa18.94■□□□□ 0.62
SDC2-202ENST00000518385 C3orf70A6NLC5 250 aaPredicted RBP18.94■□□□□ 0.62
SDC2-202ENST00000518385 SPTLC1O15269 473 aa18.94■□□□□ 0.62
SDC2-202ENST00000518385 TRUB2O95900 331 aaKnown RBP18.94■□□□□ 0.62
SDC2-202ENST00000518385 THP07101 528 aa18.94■□□□□ 0.62
SDC2-202ENST00000518385 PECAM1P16284 738 aaPredicted RBP18.94■□□□□ 0.62
SDC2-202ENST00000518385 KDELR1P24390 212 aa18.94■□□□□ 0.62
SDC2-202ENST00000518385 CCNHP51946 323 aaPredicted RBP18.94■□□□□ 0.62
SDC2-202ENST00000518385 SH3BGRP55822 239 aaPredicted RBP18.94■□□□□ 0.62
SDC2-202ENST00000518385 SOX4Q06945 474 aaPredicted RBP18.94■□□□□ 0.62
SDC2-202ENST00000518385 RBBP5Q15291 538 aaKnown RBP18.94■□□□□ 0.62
SDC2-202ENST00000518385 TBCCQ15814 346 aa18.94■□□□□ 0.62
SDC2-202ENST00000518385 HIF1AQ16665 826 aa18.94■□□□□ 0.62
SDC2-202ENST00000518385 MUM1Q2TAK8 710 aa18.94■□□□□ 0.62
SDC2-202ENST00000518385 BOLA3Q53S33 107 aa18.94■□□□□ 0.62
SDC2-202ENST00000518385 PMF1Q6P1K2 205 aa18.94■□□□□ 0.62
SDC2-202ENST00000518385 ADGRF2Q8IZF7 708 aa18.94■□□□□ 0.62
SDC2-202ENST00000518385 ARFGAP1Q8N6T3 406 aa18.94■□□□□ 0.62
SDC2-202ENST00000518385 SPATA18Q8TC71 538 aa18.94■□□□□ 0.62
SDC2-202ENST00000518385 DIS3LQ8TF46 1054 aaKnown RBP18.94■□□□□ 0.62
SDC2-202ENST00000518385 TSPYL2Q9H2G4 693 aaPredicted RBP18.94■□□□□ 0.62
SDC2-202ENST00000518385 USP18Q9UMW8 372 aa18.94■□□□□ 0.62
SDC2-202ENST00000518385 IQANK1A0A1B0GTG1 560 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 POC1B-GALNT4F8VUJ3 575 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 F8W8V4 182 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 PI4K2BG5E9Z4 385 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 SPAG7O75391 227 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 LINGO3P0C6S8 592 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 TCF4P15884 667 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 PDGFRAP16234 1089 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 MIPP30301 263 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 RPA3P35244 121 aaPredicted RBP18.93■□□□□ 0.62
SDC2-202ENST00000518385 PTDSS1P48651 473 aaKnown RBP18.93■□□□□ 0.62
SDC2-202ENST00000518385 VPS41P49754 854 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 GPS1Q13098 491 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 TAF1BQ53T94 588 aaPredicted RBP18.93■□□□□ 0.62
SDC2-202ENST00000518385 OLFML1Q6UWY5 402 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 FAM43BQ6ZT52 329 aaPredicted RBP18.93■□□□□ 0.62
SDC2-202ENST00000518385 BBS12Q6ZW61 710 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 EMC1Q8N766 993 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 RXFP2Q8WXD0 754 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 TBCBQ99426 244 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 HNRNPABQ99729 332 aaKnown RBP18.93■□□□□ 0.62
SDC2-202ENST00000518385 FAM192AQ9GZU8 254 aa18.93■□□□□ 0.62
SDC2-202ENST00000518385 RSAD1Q9HA92 442 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms