RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 TRIM49BA6NDI0 452 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 P4HA2O15460 535 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 CEACAM1P13688 526 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 FMO5P49326 533 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 HARS2P49590 506 aaKnown RBP20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 EIF4HQ15056 248 aaKnown RBP20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 TRIP4Q15650 581 aaPredicted RBP20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 DUOXA1Q1HG43 343 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 PSAPL1Q6NUJ1 521 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 KIAA1211LQ6NV74 962 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 METTL3Q86U44 580 aaKnown RBP20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 FAM217AQ8IXS0 508 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 SIX6OS1Q8N1H7 587 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 UBR7Q8N806 425 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 RNF139Q8WU17 664 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 NT5C1BQ96P26 610 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 CNGB3Q9NQW8 809 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 ABCC13Q9NSE7 274 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 TMEM74BQ9NUR3 256 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 CACNA2D2Q9NY47 1150 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 SLC6A14Q9UN76 642 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 STON1Q9Y6Q2 735 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 LAMA1P25391 3075 aa20.89■□□□□ 0.93
UBE2D3-220ENST00000505307 GON4LQ3T8J9 2241 aa20.88■□□□□ 0.93
UBE2D3-220ENST00000505307 O00370 1275 aa20.88■□□□□ 0.93
UBE2D3-220ENST00000505307 TIMM44O43615 452 aa20.88■□□□□ 0.93
UBE2D3-220ENST00000505307 ITPKAP23677 461 aa20.88■□□□□ 0.93
UBE2D3-220ENST00000505307 ZNF33AQ06730 810 aa20.88■□□□□ 0.93
UBE2D3-220ENST00000505307 STILQ15468 1287 aa20.88■□□□□ 0.93
UBE2D3-220ENST00000505307 CCDC40Q4G0X9 1142 aa20.88■□□□□ 0.93
UBE2D3-220ENST00000505307 LCLAT1Q6UWP7 414 aa20.88■□□□□ 0.93
UBE2D3-220ENST00000505307 ANKS1BQ7Z6G8 1248 aa20.88■□□□□ 0.93
UBE2D3-220ENST00000505307 ERCC4Q92889 916 aaPredicted RBP20.88■□□□□ 0.93
UBE2D3-220ENST00000505307 MRGPRX1Q96LB2 322 aa20.88■□□□□ 0.93
UBE2D3-220ENST00000505307 THAP10Q9P2Z0 257 aaPredicted RBP20.88■□□□□ 0.93
UBE2D3-220ENST00000505307 CACNA1BQ00975 2339 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 BICDL2A1A5D9 508 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 TULP2O00295 520 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 LATS1O95835 1130 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 ADIGQ0VDE8 80 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 LRMPQ12912 555 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 ENPP2Q13822 863 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 PKDCCQ504Y2 493 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 MPPE1Q53F39 396 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 SH3PXD2AQ5TCZ1 1133 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 BSPRYQ5W0U4 402 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 BHLHA9Q7RTU4 235 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 FMNL3Q8IVF7 1028 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 DDI1Q8WTU0 396 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 FOXJ1Q92949 421 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 PIWIL1Q96J94 861 aaKnown RBP20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 ELOVL2Q9NXB9 296 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 CYP8B1Q9UNU6 501 aa20.87■□□□□ 0.93
UBE2D3-220ENST00000505307 NDUFS2O75306 463 aa20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 SERPINF2P08697 491 aa20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 ENGP17813 658 aa20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 ATXN3P54252 364 aaPredicted RBP20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 GFPT1Q06210 699 aaPredicted RBP20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 CNGA2Q16280 664 aa20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 GEN1Q17RS7 908 aa20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 SYCP2LQ5T4T6 812 aa20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 TMEM270Q6UE05 265 aa20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 UBA3Q8TBC4 463 aa20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 IRGQQ8WZA9 623 aa20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 P2RY11Q96G91 374 aa20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 ZNF419Q96HQ0 510 aaPredicted RBP20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 IRX2Q9BZI1 471 aaPredicted RBP20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 STOML2Q9UJZ1 356 aa20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 MAN1B1Q9UKM7 699 aa20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 PCDHB4Q9Y5E5 795 aa20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 RAD54BQ9Y620 910 aa20.86■□□□□ 0.93
UBE2D3-220ENST00000505307 WASH3PC4AMC7 463 aa20.85■□□□□ 0.93
UBE2D3-220ENST00000505307 SYNCRIPO60506 623 aaKnown RBP20.85■□□□□ 0.93
UBE2D3-220ENST00000505307 GNA14O95837 355 aa20.85■□□□□ 0.93
UBE2D3-220ENST00000505307 CFIP05156 583 aa20.85■□□□□ 0.93
UBE2D3-220ENST00000505307 UAP1L1Q3KQV9 507 aa20.85■□□□□ 0.93
UBE2D3-220ENST00000505307 TTI2Q6NXR4 508 aa20.85■□□□□ 0.93
UBE2D3-220ENST00000505307 KIAA1324Q6UXG2 1013 aaKnown RBP20.85■□□□□ 0.93
UBE2D3-220ENST00000505307 PPM1KQ8N3J5 372 aa20.85■□□□□ 0.93
UBE2D3-220ENST00000505307 SLC35F5Q8WV83 523 aa20.85■□□□□ 0.93
UBE2D3-220ENST00000505307 HSFY1Q96LI6 401 aa20.85■□□□□ 0.93
UBE2D3-220ENST00000505307 SLC32A1Q9H598 525 aa20.85■□□□□ 0.93
UBE2D3-220ENST00000505307 PRDM16Q9HAZ2 1276 aa20.85■□□□□ 0.93
UBE2D3-220ENST00000505307 SUSD2Q9UGT4 822 aa20.85■□□□□ 0.93
UBE2D3-220ENST00000505307 TNRC6BQ9UPQ9 1833 aaKnown RBP20.85■□□□□ 0.93
UBE2D3-220ENST00000505307 CHD8Q9HCK8 2581 aa20.85■□□□□ 0.93
UBE2D3-220ENST00000505307 PI4KAP42356 2102 aa20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 YJEFN3A6XGL0 299 aa20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 UPK3BL1B0FP48 263 aa20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 UPK3BL2E5RIL1 263 aa20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 E7ENQ6 273 aa20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 KRT37O76014 449 aa20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 CD44P16070 742 aaKnown RBP20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 CD6P30203 668 aa20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 IL12RB1P42701 662 aa20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 DAOAP59103 153 aa20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 GCNT1Q02742 428 aa20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 FUT11Q495W5 492 aa20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 ADGRF1Q5T601 910 aa20.84■□□□□ 0.93
UBE2D3-220ENST00000505307 MSANTD2Q6P1R3 559 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms