RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 TBCBQ99426 244 aa15.05■□□□□ -0
USP11-212ENST00000497179 EIF3CQ99613 913 aaKnown RBP15.05■□□□□ -0
USP11-212ENST00000497179 FAM83CQ9BQN1 747 aa15.05■□□□□ -0
USP11-212ENST00000497179 PACSIN1Q9BY11 444 aa15.05■□□□□ -0
USP11-212ENST00000497179 ADAM33Q9BZ11 813 aa15.05■□□□□ -0
USP11-212ENST00000497179 BRD9Q9H8M2 597 aa15.05■□□□□ -0
USP11-212ENST00000497179 MRPL47Q9HD33 250 aaKnown RBP15.05■□□□□ -0
USP11-212ENST00000497179 TRPV5Q9NQA5 729 aa15.05■□□□□ -0
USP11-212ENST00000497179 TMEM51Q9NW97 253 aa15.05■□□□□ -0
USP11-212ENST00000497179 DDIT4Q9NX09 232 aa15.05■□□□□ -0
USP11-212ENST00000497179 MUTYHQ9UIF7 546 aa15.05■□□□□ -0
USP11-212ENST00000497179 WNT6Q9Y6F9 365 aa15.05■□□□□ -0
USP11-212ENST00000497179 TMEM191CA6NGB0 347 aa15.04■□□□□ -0
USP11-212ENST00000497179 SCAMP3O14828 347 aaKnown RBP15.04■□□□□ -0
USP11-212ENST00000497179 ENDOD1O94919 500 aa15.04■□□□□ -0
USP11-212ENST00000497179 NDUFA10O95299 355 aa15.04■□□□□ -0
USP11-212ENST00000497179 LATS1O95835 1130 aa15.04■□□□□ -0
USP11-212ENST00000497179 KLKB1P03952 638 aa15.04■□□□□ -0
USP11-212ENST00000497179 TFE3P19532 575 aaPredicted RBP15.04■□□□□ -0
USP11-212ENST00000497179 CORO1AP31146 461 aaKnown RBP15.04■□□□□ -0
USP11-212ENST00000497179 GBP1P32455 592 aa15.04■□□□□ -0
USP11-212ENST00000497179 HARS2P49590 506 aaKnown RBP15.04■□□□□ -0
USP11-212ENST00000497179 ZNF143P52747 638 aaPredicted RBP15.04■□□□□ -0
USP11-212ENST00000497179 EML3Q32P44 896 aa15.04■□□□□ -0
USP11-212ENST00000497179 CCDC14Q49A88 953 aa15.04■□□□□ -0
USP11-212ENST00000497179 UNC45BQ8IWX7 931 aa15.04■□□□□ -0
USP11-212ENST00000497179 BBS7Q8IWZ6 715 aa15.04■□□□□ -0
USP11-212ENST00000497179 UBALD2Q8IYN6 164 aa15.04■□□□□ -0
USP11-212ENST00000497179 CTNNBL1Q8WYA6 563 aaPredicted RBP15.04■□□□□ -0
USP11-212ENST00000497179 OTUB2Q96DC9 234 aa15.04■□□□□ -0
USP11-212ENST00000497179 PDLIM2Q96JY6 352 aa15.04■□□□□ -0
USP11-212ENST00000497179 ZFYVE19Q96K21 471 aa15.04■□□□□ -0
USP11-212ENST00000497179 DUS2Q9NX74 493 aaKnown RBP15.04■□□□□ -0
USP11-212ENST00000497179 CALCOCO1Q9P1Z2 691 aa15.04■□□□□ -0
USP11-212ENST00000497179 TBC1D14Q9P2M4 693 aa15.04■□□□□ -0
USP11-212ENST00000497179 MYO1AQ9UBC5 1043 aa15.04■□□□□ -0
USP11-212ENST00000497179 INTUQ9ULD6 942 aa15.04■□□□□ -0
USP11-212ENST00000497179 ZNF510Q9Y2H8 683 aa15.04■□□□□ -0
USP11-212ENST00000497179 EPN1Q9Y6I3 576 aaPredicted RBP15.04■□□□□ -0
USP11-212ENST00000497179 COL4A3Q01955 1670 aa15.03■□□□□ -0
USP11-212ENST00000497179 F9P00740 461 aa15.03■□□□□ -0
USP11-212ENST00000497179 RDXP35241 583 aaKnown RBP15.03■□□□□ -0
USP11-212ENST00000497179 CXCR3P49682 368 aa15.03■□□□□ -0
USP11-212ENST00000497179 PFKPQ01813 784 aa15.03■□□□□ -0
USP11-212ENST00000497179 OGDHQ02218 1023 aa15.03■□□□□ -0
USP11-212ENST00000497179 NME3Q13232 169 aa15.03■□□□□ -0
USP11-212ENST00000497179 PPP2R5DQ14738 602 aa15.03■□□□□ -0
USP11-212ENST00000497179 SPA17Q15506 151 aa15.03■□□□□ -0
USP11-212ENST00000497179 ZC3H12AQ5D1E8 599 aaKnown RBP15.03■□□□□ -0
USP11-212ENST00000497179 TRIM68Q6AZZ1 485 aa15.03■□□□□ -0
USP11-212ENST00000497179 STRADAQ7RTN6 431 aa15.03■□□□□ -0
USP11-212ENST00000497179 CCDC112Q8NEF3 446 aa15.03■□□□□ -0
USP11-212ENST00000497179 FNIP1Q8TF40 1166 aa15.03■□□□□ -0
USP11-212ENST00000497179 CENPIQ92674 756 aaPredicted RBP15.03■□□□□ -0
USP11-212ENST00000497179 ATP2A3Q93084 1043 aa15.03■□□□□ -0
USP11-212ENST00000497179 AZIN2Q96A70 460 aa15.03■□□□□ -0
USP11-212ENST00000497179 CNPY3Q9BT09 278 aa15.03■□□□□ -0
USP11-212ENST00000497179 HPS4Q9NQG7 708 aa15.03■□□□□ -0
USP11-212ENST00000497179 PIGVQ9NUD9 493 aa15.03■□□□□ -0
USP11-212ENST00000497179 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.03■□□□□ -0
USP11-212ENST00000497179 AGO1Q9UL18 857 aaKnown RBP15.03■□□□□ -0
USP11-212ENST00000497179 SYNJ2BP-COX16A0A087WUM0 186 aa15.02■□□□□ -0
USP11-212ENST00000497179 CCP110O43303 1012 aa15.02■□□□□ -0
USP11-212ENST00000497179 IPO7O95373 1038 aaKnown RBP15.02■□□□□ -0
USP11-212ENST00000497179 NFATC1O95644 943 aa15.02■□□□□ -0
USP11-212ENST00000497179 APOEP02649 317 aa15.02■□□□□ -0
USP11-212ENST00000497179 SLC2A3P11169 496 aa15.02■□□□□ -0
USP11-212ENST00000497179 ARSAP15289 507 aa15.02■□□□□ -0
USP11-212ENST00000497179 CCR1P32246 355 aa15.02■□□□□ -0
USP11-212ENST00000497179 MAGEA1P43355 309 aa15.02■□□□□ -0
USP11-212ENST00000497179 ATP11AP98196 1134 aa15.02■□□□□ -0
USP11-212ENST00000497179 DEUP1Q05D60 604 aa15.02■□□□□ -0
USP11-212ENST00000497179 ZNF252P-AS1Q0IIN9 211 aa15.02■□□□□ -0
USP11-212ENST00000497179 C15orf59Q2T9L4 293 aaPredicted RBP15.02■□□□□ -0
USP11-212ENST00000497179 BRMS1LQ5PSV4 323 aa15.02■□□□□ -0
USP11-212ENST00000497179 DENND1CQ8IV53 801 aa15.02■□□□□ -0
USP11-212ENST00000497179 FAM217AQ8IXS0 508 aa15.02■□□□□ -0
USP11-212ENST00000497179 FAM172AQ8WUF8 416 aa15.02■□□□□ -0
USP11-212ENST00000497179 NUP85Q9BW27 656 aa15.02■□□□□ -0
USP11-212ENST00000497179 TRIM7Q9C029 511 aa15.02■□□□□ -0
USP11-212ENST00000497179 LINC00597Q9H2U6 94 aa15.02■□□□□ -0
USP11-212ENST00000497179 EBF3Q9H4W6 596 aa15.02■□□□□ -0
USP11-212ENST00000497179 LUC7LQ9NQ29 371 aaKnown RBP15.02■□□□□ -0
USP11-212ENST00000497179 COX16Q9P0S2 106 aa15.02■□□□□ -0
USP11-212ENST00000497179 UVRAGQ9P2Y5 699 aa15.02■□□□□ -0
USP11-212ENST00000497179 STOML2Q9UJZ1 356 aa15.02■□□□□ -0
USP11-212ENST00000497179 PAXBP1Q9Y5B6 917 aa15.02■□□□□ -0
USP11-212ENST00000497179 MUC3AQ02505 3323 aa15.01□□□□□ -0.01
USP11-212ENST00000497179 NCOR1O75376 2440 aa15.01□□□□□ -0.01
USP11-212ENST00000497179 KCNU1A8MYU2 1149 aa15.01□□□□□ -0.01
USP11-212ENST00000497179 DCXO43602 365 aa15.01□□□□□ -0.01
USP11-212ENST00000497179 ACSL4O60488 711 aa15.01□□□□□ -0.01
USP11-212ENST00000497179 SLC11A2P49281 568 aa15.01□□□□□ -0.01
USP11-212ENST00000497179 ZXDAP98168 799 aa15.01□□□□□ -0.01
USP11-212ENST00000497179 TNK2Q07912 1038 aa15.01□□□□□ -0.01
USP11-212ENST00000497179 MTA1Q13330 715 aa15.01□□□□□ -0.01
USP11-212ENST00000497179 RUNX3Q13761 415 aa15.01□□□□□ -0.01
USP11-212ENST00000497179 CDO1Q16878 200 aa15.01□□□□□ -0.01
USP11-212ENST00000497179 ITPRIPL2Q3MIP1 535 aa15.01□□□□□ -0.01
USP11-212ENST00000497179 SH3PXD2AQ5TCZ1 1133 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms