RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 DLL3Q9NYJ7 618 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 PI4KBQ9UBF8 816 aa6.14□□□□□ -1.43
SSR3-208ENST00000496050 CCDC196A0A1B0GTZ2 297 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 SLC38A8A6NNN8 435 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 J3KRW8 73 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 NKX2-8O15522 239 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 CA12O43570 354 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 URI1O94763 535 aaPredicted RBP6.13□□□□□ -1.43
SSR3-208ENST00000496050 ESRRBO95718 433 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 NPSP0C0P6 89 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 TMIGD3P0DMS9 266 aaPredicted RBP6.13□□□□□ -1.43
SSR3-208ENST00000496050 ALADP13716 330 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 TGM1P22735 817 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 CTGFP29279 349 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 IGHMBP2P38935 993 aaKnown RBP6.13□□□□□ -1.43
SSR3-208ENST00000496050 CHRNDQ07001 517 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 CCDC15Q0P6D6 951 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 MAPK7Q13164 816 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 DLGAP5Q15398 846 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 L1TD1Q5T7N2 865 aaKnown RBP6.13□□□□□ -1.43
SSR3-208ENST00000496050 RETSATQ6NUM9 610 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 TMED8Q6PL24 325 aaPredicted RBP6.13□□□□□ -1.43
SSR3-208ENST00000496050 TMTC1Q8IUR5 882 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 SFTPA1Q8IWL2 248 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 SLC44A3Q8N4M1 653 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 C12orf76Q8N812 135 aaPredicted RBP6.13□□□□□ -1.43
SSR3-208ENST00000496050 FSIP1Q8NA03 581 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 PPHLN1Q8NEY8 458 aaKnown RBP6.13□□□□□ -1.43
SSR3-208ENST00000496050 HVCN1Q96D96 273 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 ABHD16BQ9H3Z7 469 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 USP29Q9HBJ7 922 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 VPS45Q9NRW7 570 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 ASAP1Q9ULH1 1129 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 SLC12A4Q9UP95 1085 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 TMEM98Q9Y2Y6 226 aa6.13□□□□□ -1.43
SSR3-208ENST00000496050 CCDC187A0A096LP49 1063 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 FAM90A20PA6NIJ5 464 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 SAC3D1A6NKF1 404 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 HNRNPRO43390 633 aaKnown RBP6.12□□□□□ -1.43
SSR3-208ENST00000496050 TSPAN3O60637 253 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 CYP3A4P08684 503 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 CNPP09543 421 aaKnown RBP6.12□□□□□ -1.43
SSR3-208ENST00000496050 ENGP17813 658 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 MPLP40238 635 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 PCP4P48539 62 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 DIO1P49895 249 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 EEFSECP57772 596 aaKnown RBP6.12□□□□□ -1.43
SSR3-208ENST00000496050 RPL15P61313 204 aaKnown RBP6.12□□□□□ -1.43
SSR3-208ENST00000496050 RNASELQ05823 741 aaKnown RBP6.12□□□□□ -1.43
SSR3-208ENST00000496050 FAM187BQ17R55 369 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 MAP3K21Q5TCX8 1036 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 FNDC7Q5VTL7 733 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 OR52L2PQ8NGH6 319 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 GLMPQ8WWB7 406 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 LINC00476Q8WZB0 136 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 SLC9A6Q92581 669 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 PRR11Q96HE9 360 aaPredicted RBP6.12□□□□□ -1.43
SSR3-208ENST00000496050 LENG8Q96PV6 779 aaPredicted RBP6.12□□□□□ -1.43
SSR3-208ENST00000496050 PIGSQ96S52 555 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 SLC26A6Q9BXS9 759 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 ZNF341Q9BYN7 854 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 SAP30LQ9HAJ7 183 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 PRDM16Q9HAZ2 1276 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 SYBUQ9NX95 663 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 TFCP2L1Q9NZI6 479 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 RAB21Q9UL25 225 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 PCDHA10Q9Y5I2 948 aa6.12□□□□□ -1.43
SSR3-208ENST00000496050 COL4A3Q01955 1670 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 MBD3L5A6NJ08 208 aaPredicted RBP6.11□□□□□ -1.43
SSR3-208ENST00000496050 M0QZQ0 153 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 C1RP00736 705 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 MATN1P21941 496 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 ELF1P32519 619 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 GRK5P34947 590 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 SEC24CP53992 1094 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 PDCLQ13371 301 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 DCTN1Q14203 1278 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 AARS2Q5JTZ9 985 aaKnown RBP6.11□□□□□ -1.43
SSR3-208ENST00000496050 PCID2Q5JVF3 399 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 WDR93Q6P2C0 686 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 BBS12Q6ZW61 710 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 SPRED1Q7Z699 444 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 PEG10Q86TG7 708 aaKnown RBP6.11□□□□□ -1.43
SSR3-208ENST00000496050 NPIPB3Q92617 1050 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 SKA1Q96BD8 255 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 KTI12Q96EK9 354 aaPredicted RBP6.11□□□□□ -1.43
SSR3-208ENST00000496050 TWNKQ96RR1 684 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 FSD1LQ9BXM9 530 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 MMRN2Q9H8L6 949 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 TMEM160Q9NX00 188 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 TRPC5Q9UL62 973 aaPredicted RBP6.11□□□□□ -1.43
SSR3-208ENST00000496050 ADAMTS5Q9UNA0 930 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 PCDHB2Q9Y5E7 798 aa6.11□□□□□ -1.43
SSR3-208ENST00000496050 TTC34A8MYJ7 566 aa6.1□□□□□ -1.43
SSR3-208ENST00000496050 TISP43B9A030 160 aa6.1□□□□□ -1.43
SSR3-208ENST00000496050 M0QYT0 321 aa6.1□□□□□ -1.43
SSR3-208ENST00000496050 SUV39H1O43463 412 aa6.1□□□□□ -1.43
SSR3-208ENST00000496050 EBLN1P0CF75 366 aa6.1□□□□□ -1.43
SSR3-208ENST00000496050 TNNT1P13805 278 aa6.1□□□□□ -1.43
SSR3-208ENST00000496050 DUSP1P28562 367 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms