RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 CDT1Q9H211 546 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 RGL1Q9NZL6 768 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 TRPM5Q9NZQ8 1165 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 SH3BP1Q9Y3L3 701 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 LOXL2Q9Y4K0 774 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 ANAPC1Q9H1A4 1944 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 C9orf172C9J069 976 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 STMND1H3BQB6 276 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 K7ESM1 405 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 PPEF2O14830 753 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 PRPF3O43395 683 aaKnown RBP7□□□□□ -1.29
HDAC3-206ENST00000471968 NEBLO76041 1014 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 SORBS2O94875 1100 aaKnown RBP7□□□□□ -1.29
HDAC3-206ENST00000471968 OLFM2O95897 454 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 PDGFAP04085 211 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 CISD3P0C7P0 127 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 MX1P20591 662 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 ACO1P21399 889 aaKnown RBP7□□□□□ -1.29
HDAC3-206ENST00000471968 CD82P27701 267 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 OAS2P29728 719 aaKnown RBP7□□□□□ -1.29
HDAC3-206ENST00000471968 LRPAP1P30533 357 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 ETV5P41161 510 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 TRAPPC10P48553 1259 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 GUCY2FP51841 1108 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 GALCP54803 685 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 RPS14P62263 151 aaKnown RBP7□□□□□ -1.29
HDAC3-206ENST00000471968 CTTNQ14247 550 aaKnown RBP7□□□□□ -1.29
HDAC3-206ENST00000471968 ZNF568Q3ZCX4 644 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 SERPINA13PQ6UXR4 307 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 RALYLQ86SE5 291 aaKnown RBP7□□□□□ -1.29
HDAC3-206ENST00000471968 SCN4BQ8IWT1 228 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 DCP1BQ8IZD4 617 aaKnown RBP7□□□□□ -1.29
HDAC3-206ENST00000471968 THEM5Q8N1Q8 247 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 MFSD2AQ8NA29 543 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 GTF3C6Q969F1 213 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 HVCN1Q96D96 273 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 CCDC43Q96MW1 224 aaKnown RBP7□□□□□ -1.29
HDAC3-206ENST00000471968 DUSP23Q9BVJ7 150 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 ZBTB40Q9NUA8 1239 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 PCDHGB6Q9Y5F9 930 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 CNTNAP5Q8WYK1 1306 aa7□□□□□ -1.29
HDAC3-206ENST00000471968 TGP01266 2768 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 TARSL2A2RTX5 802 aaKnown RBP6.99□□□□□ -1.29
HDAC3-206ENST00000471968 EME2A4GXA9 379 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-206ENST00000471968 ZNF840PA6NDX5 716 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-206ENST00000471968 hCG_1984214I3L0E3 225 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 MUSKO15146 869 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 MAGEC1O60732 1142 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 USO1O60763 962 aaKnown RBP6.99□□□□□ -1.29
HDAC3-206ENST00000471968 ZG16O60844 167 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 PIAS2O75928 621 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 SIX3O95343 332 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-206ENST00000471968 CBX6O95503 412 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 HARSP12081 509 aaKnown RBP6.99□□□□□ -1.29
HDAC3-206ENST00000471968 ANTXR2P58335 489 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 LILRA4P59901 499 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 MYL7Q01449 175 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 RAD51AP2Q09MP3 1159 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 GEN1Q17RS7 908 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 ATP1A1-AS1Q5TC04 95 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 TMEM198Q66K66 360 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 NAPEPLDQ6IQ20 393 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 METTL23Q86XA0 190 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 ZNF295-AS1Q8N0V1 137 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 ZNF713Q8N859 430 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-206ENST00000471968 ZNF366Q8N895 744 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 WDR48Q8TAF3 677 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 DEPTORQ8TB45 409 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 UCMAQ8WVF2 138 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 SORCS1Q8WY21 1168 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 DYDC2Q96IM9 177 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 DSCC1Q9BVC3 393 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 KIFC3Q9BVG8 833 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 ZSWIM4Q9H7M6 989 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 LUZP4Q9P127 313 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 GGT7Q9UJ14 662 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 NCKAP1Q9Y2A7 1128 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 SNX14Q9Y5W7 946 aa6.99□□□□□ -1.29
HDAC3-206ENST00000471968 V9GY48 417 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-206ENST00000471968 CKAP5Q14008 2032 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 ANKUB1A6NFN9 424 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 NEMP2A6NFY4 417 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 CCDC69A6NI79 296 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 LRRC72A6NJI9 287 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 TMX2-CTNND1H3BSU7 103 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 SCAMP1O15126 338 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 TDP2O95551 362 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 OAS1P00973 400 aaKnown RBP6.98□□□□□ -1.29
HDAC3-206ENST00000471968 CYP11A1P05108 521 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 IRF1P10914 325 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 SSTR2P30874 369 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 COPB1P53618 953 aaKnown RBP6.98□□□□□ -1.29
HDAC3-206ENST00000471968 PER3P56645 1201 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 USP46P62068 366 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 ZBTB16Q05516 673 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 SFSWAPQ12872 951 aaKnown RBP6.98□□□□□ -1.29
HDAC3-206ENST00000471968 ADAM9Q13443 819 aa6.98□□□□□ -1.29
HDAC3-206ENST00000471968 CAMK2GQ13555 558 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-206ENST00000471968 ELOAQ14241 798 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms