RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 GJB7Q6PEY0 223 aa21.88■■□□□ 1.09
SREBF1-210ENST00000471445 GBP6Q6ZN66 633 aa21.88■■□□□ 1.09
SREBF1-210ENST00000471445 ACOX2Q99424 681 aa21.88■■□□□ 1.09
SREBF1-210ENST00000471445 GABRG3Q99928 467 aa21.88■■□□□ 1.09
SREBF1-210ENST00000471445 RTKNQ9BST9 563 aa21.88■■□□□ 1.09
SREBF1-210ENST00000471445 THAP9Q9H5L6 903 aa21.88■■□□□ 1.09
SREBF1-210ENST00000471445 CD248Q9HCU0 757 aa21.88■■□□□ 1.09
SREBF1-210ENST00000471445 APEX2Q9UBZ4 518 aa21.88■■□□□ 1.09
SREBF1-210ENST00000471445 STOML2Q9UJZ1 356 aa21.88■■□□□ 1.09
SREBF1-210ENST00000471445 INVSQ9Y283 1065 aa21.88■■□□□ 1.09
SREBF1-210ENST00000471445 FRYLO94915 3013 aa21.88■■□□□ 1.09
SREBF1-210ENST00000471445 A0A1W2PQF6 199 aa21.87■■□□□ 1.09
SREBF1-210ENST00000471445 GFRA2O00451 464 aa21.87■■□□□ 1.09
SREBF1-210ENST00000471445 LTFP02788 710 aa21.87■■□□□ 1.09
SREBF1-210ENST00000471445 CYBBP04839 570 aa21.87■■□□□ 1.09
SREBF1-210ENST00000471445 ZNF806P0C7X5 589 aa21.87■■□□□ 1.09
SREBF1-210ENST00000471445 SLC9A1P19634 815 aa21.87■■□□□ 1.09
SREBF1-210ENST00000471445 P2RY2P41231 377 aa21.87■■□□□ 1.09
SREBF1-210ENST00000471445 ATXN1P54253 815 aaKnown RBP21.87■■□□□ 1.09
SREBF1-210ENST00000471445 CCDC6Q16204 474 aa21.87■■□□□ 1.09
SREBF1-210ENST00000471445 CREBRFQ8IUR6 639 aa21.87■■□□□ 1.09
SREBF1-210ENST00000471445 CHPFQ8IZ52 775 aa21.87■■□□□ 1.09
SREBF1-210ENST00000471445 HMGB4Q8WW32 186 aa21.87■■□□□ 1.09
SREBF1-210ENST00000471445 BCCIPQ9P287 314 aaKnown RBP eCLIP21.87■■□□□ 1.09
SREBF1-210ENST00000471445 CACNA1AO00555 2505 aa21.87■■□□□ 1.09
SREBF1-210ENST00000471445 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.86■■□□□ 1.09
SREBF1-210ENST00000471445 BECN2A8MW95 431 aa21.86■■□□□ 1.09
SREBF1-210ENST00000471445 IGLV3-27P01718 113 aa21.86■■□□□ 1.09
SREBF1-210ENST00000471445 GABRG2P18507 467 aa21.86■■□□□ 1.09
SREBF1-210ENST00000471445 GNA15P30679 374 aa21.86■■□□□ 1.09
SREBF1-210ENST00000471445 WASP42768 502 aa21.86■■□□□ 1.09
SREBF1-210ENST00000471445 MTIF2P46199 727 aaKnown RBP21.86■■□□□ 1.09
SREBF1-210ENST00000471445 HARS2P49590 506 aaKnown RBP21.86■■□□□ 1.09
SREBF1-210ENST00000471445 ZNF445P59923 1031 aa21.86■■□□□ 1.09
SREBF1-210ENST00000471445 APBA1Q02410 837 aa21.86■■□□□ 1.09
SREBF1-210ENST00000471445 SF3A2Q15428 464 aaKnown RBP21.86■■□□□ 1.09
SREBF1-210ENST00000471445 MAN2A1Q16706 1144 aa21.86■■□□□ 1.09
SREBF1-210ENST00000471445 EXOC3L4Q17RC7 722 aa21.86■■□□□ 1.09
SREBF1-210ENST00000471445 GEN1Q17RS7 908 aa21.86■■□□□ 1.09
SREBF1-210ENST00000471445 DENND1BQ6P3S1 775 aa21.86■■□□□ 1.09
SREBF1-210ENST00000471445 SPACA7Q96KW9 195 aa21.86■■□□□ 1.09
SREBF1-210ENST00000471445 SLC30A4O14863 429 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 MED7O43513 233 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 GDF9O60383 454 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 PON1P27169 355 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 ERCC5P28715 1186 aaPredicted RBP21.85■■□□□ 1.09
SREBF1-210ENST00000471445 TPD52L1Q16890 204 aaPredicted RBP21.85■■□□□ 1.09
SREBF1-210ENST00000471445 MAP7D1Q3KQU3 841 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 SMYD5Q6GMV2 418 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 ANKS1BQ7Z6G8 1248 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 FAM114A1Q8IWE2 563 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 C12orf50Q8NA57 414 aaPredicted RBP21.85■■□□□ 1.09
SREBF1-210ENST00000471445 STK32AQ8WU08 396 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 ZNF606Q8WXB4 792 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 RLN3Q8WXF3 142 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 SHC3Q92529 594 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 GOLGA1Q92805 767 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 PIWIL1Q96J94 861 aaKnown RBP21.85■■□□□ 1.09
SREBF1-210ENST00000471445 MIS12Q9H081 205 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 SIX2Q9NPC8 291 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 ACP6Q9NPH0 428 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 VPS45Q9NRW7 570 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 LMBRD1Q9NUN5 540 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 DACH1Q9UI36 760 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 CLEC4EQ9ULY5 219 aa21.85■■□□□ 1.09
SREBF1-210ENST00000471445 BCLAF3A2AJT9 711 aaKnown RBP21.84■■□□□ 1.09
SREBF1-210ENST00000471445 SART1O43290 800 aaKnown RBP21.84■■□□□ 1.09
SREBF1-210ENST00000471445 THAP12O43422 761 aa21.84■■□□□ 1.09
SREBF1-210ENST00000471445 LETM1O95202 739 aaPredicted RBP21.84■■□□□ 1.09
SREBF1-210ENST00000471445 FYNP06241 537 aa21.84■■□□□ 1.09
SREBF1-210ENST00000471445 HOXD9P28356 352 aaPredicted RBP21.84■■□□□ 1.09
SREBF1-210ENST00000471445 ACADSBP45954 432 aa21.84■■□□□ 1.09
SREBF1-210ENST00000471445 LIMK1P53667 647 aa21.84■■□□□ 1.09
SREBF1-210ENST00000471445 CREB5Q02930 508 aa21.84■■□□□ 1.09
SREBF1-210ENST00000471445 AASDHQ4L235 1098 aaPredicted RBP21.84■■□□□ 1.09
SREBF1-210ENST00000471445 MPPE1Q53F39 396 aa21.84■■□□□ 1.09
SREBF1-210ENST00000471445 SDE2Q6IQ49 451 aa21.84■■□□□ 1.09
SREBF1-210ENST00000471445 KIAA1211LQ6NV74 962 aa21.84■■□□□ 1.09
SREBF1-210ENST00000471445 IPO4Q8TEX9 1081 aaKnown RBP21.84■■□□□ 1.09
SREBF1-210ENST00000471445 DDI1Q8WTU0 396 aa21.84■■□□□ 1.09
SREBF1-210ENST00000471445 SLC4A5Q9BY07 1137 aa21.84■■□□□ 1.09
SREBF1-210ENST00000471445 SLC2A11Q9BYW1 496 aa21.84■■□□□ 1.09
SREBF1-210ENST00000471445 SMOC1Q9H4F8 434 aa21.84■■□□□ 1.09
SREBF1-210ENST00000471445 ST7Q9NRC1 585 aa21.84■■□□□ 1.09
SREBF1-210ENST00000471445 CACNA2D2Q9NY47 1150 aa21.84■■□□□ 1.09
SREBF1-210ENST00000471445 CYTH4Q9UIA0 394 aa21.84■■□□□ 1.09
SREBF1-210ENST00000471445 AJAP1Q9UKB5 411 aaPredicted RBP21.84■■□□□ 1.09
SREBF1-210ENST00000471445 RING1Q06587 406 aa21.83■■□□□ 1.09
SREBF1-210ENST00000471445 NNTQ13423 1086 aa21.83■■□□□ 1.09
SREBF1-210ENST00000471445 ENPP2Q13822 863 aa21.83■■□□□ 1.09
SREBF1-210ENST00000471445 EIF4HQ15056 248 aaKnown RBP21.83■■□□□ 1.09
SREBF1-210ENST00000471445 ARHGAP44Q17R89 818 aa21.83■■□□□ 1.09
SREBF1-210ENST00000471445 ADGRF1Q5T601 910 aa21.83■■□□□ 1.09
SREBF1-210ENST00000471445 NUGGCQ68CJ6 796 aa21.83■■□□□ 1.09
SREBF1-210ENST00000471445 PGBD3Q8N328 593 aa21.83■■□□□ 1.09
SREBF1-210ENST00000471445 CALCOCO1Q9P1Z2 691 aa21.83■■□□□ 1.09
SREBF1-210ENST00000471445 MBD1Q9UIS9 605 aaPredicted RBP21.83■■□□□ 1.09
SREBF1-210ENST00000471445 RAD54BQ9Y620 910 aa21.83■■□□□ 1.09
SREBF1-210ENST00000471445 MED19A0JLT2 244 aaPredicted RBP21.82■■□□□ 1.08
SREBF1-210ENST00000471445 NDUFV2P19404 249 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms