RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 PPM1NQ8N819 430 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 EDEM1Q92611 657 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 ERP27Q96DN0 273 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 APOL2Q9BQE5 337 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 CYTH4Q9UIA0 394 aa12.75□□□□□ -0.37
USP11-206ENST00000469080 KRT36O76013 467 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 TPPPO94811 219 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 ACO1P21399 889 aaKnown RBP12.74□□□□□ -0.37
USP11-206ENST00000469080 MAGEA4P43358 317 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 CDK7P50613 346 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 SESN2P58004 480 aaPredicted RBP12.74□□□□□ -0.37
USP11-206ENST00000469080 YWHAEP62258 255 aaKnown RBP12.74□□□□□ -0.37
USP11-206ENST00000469080 SEPT6Q14141 434 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 KLHL35Q6PF15 583 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 ISLR2Q6UXK2 745 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 MON1BQ7L1V2 547 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 HACE1Q8IYU2 909 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 CCDC110Q8TBZ0 833 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 DEPDC1BQ8WUY9 529 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 FBXL18Q96ME1 805 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 CEP44Q9C0F1 390 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 LRRC4Q9HBW1 653 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 CPSF3Q9UKF6 684 aaKnown RBP12.74□□□□□ -0.37
USP11-206ENST00000469080 COQ4Q9Y3A0 265 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 SDK1Q7Z5N4 2213 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 M0QZ92 97 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 RIPK2O43353 540 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 GRIN3BO60391 1043 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 ZBED1O96006 694 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 IL1R2P27930 398 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 ECHS1P30084 290 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 ABCG1P45844 678 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 SERPINB8P50452 374 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 GDF10P55107 478 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 RBP5P82980 135 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 MBTD1Q05BQ5 628 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 ARHGAP1Q07960 439 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 OVGP1Q12889 678 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 CCDC153Q494R4 210 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 CES3Q6UWW8 571 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 PATL1Q86TB9 770 aaKnown RBP12.74□□□□□ -0.37
USP11-206ENST00000469080 FAM172AQ8WUF8 416 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 ATXN2LQ8WWM7 1075 aaKnown RBP12.74□□□□□ -0.37
USP11-206ENST00000469080 CENPTQ96BT3 561 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 PGLYRP2Q96PD5 576 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 TBC1D10AQ9BXI6 508 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 ST6GALNAC4Q9H4F1 302 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 TRPC7Q9HCX4 862 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 UBP1Q9NZI7 540 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 GLTPD2A6NH11 291 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 SCAMP3O14828 347 aaKnown RBP12.74□□□□□ -0.37
USP11-206ENST00000469080 KITP10721 976 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 PPP1R2P3Q6NXS1 205 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 ZDHHC24Q6UX98 284 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 ZPBP2Q6X784 338 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 SCN4BQ8IWT1 228 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 RASGEF1CQ8N431 466 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 SLC2A14Q8TDB8 520 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 TTC17Q96AE7 1141 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 NACC2Q96BF6 587 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 NIFKQ9BYG3 293 aaKnown RBP12.74□□□□□ -0.37
USP11-206ENST00000469080 PDLIM7Q9NR12 457 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 SIX4Q9UIU6 781 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 USP18Q9UMW8 372 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 PPP2R3BQ9Y5P8 575 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 LTBP1Q14766 1721 aa12.74□□□□□ -0.37
USP11-206ENST00000469080 XPOTO43592 962 aaKnown RBP12.73□□□□□ -0.37
USP11-206ENST00000469080 HUS1O60921 280 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 LMNAP02545 664 aaKnown RBP12.73□□□□□ -0.37
USP11-206ENST00000469080 SRGAP2BP0DMP2 458 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 HSPA6P17066 643 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 TFE3P19532 575 aaPredicted RBP12.73□□□□□ -0.37
USP11-206ENST00000469080 S100A1P23297 94 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 DNAJC3Q13217 504 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 GAD1Q99259 594 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 TPK1Q9H3S4 243 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 PDZD7Q9H5P4 517 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 GRHL1Q9NZI5 618 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 ADAMTS5Q9UNA0 930 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 SSX2IPQ9Y2D8 614 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 LRRC37AA6NMS7 1700 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 USP12O75317 370 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 PGM3O95394 542 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 MMP8P22894 467 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 EIF2B2P49770 351 aaKnown RBP12.73□□□□□ -0.37
USP11-206ENST00000469080 CENPCQ03188 943 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 AP1B1Q10567 949 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 CAMK2BQ13554 666 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 PPP2R5EQ16537 467 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 NFIL3Q16649 462 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 C3orf62Q6ZUJ4 267 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 TAOK1Q7L7X3 1001 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 UNC45BQ8IWX7 931 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 RAVER1Q8IY67 606 aaKnown RBP12.73□□□□□ -0.37
USP11-206ENST00000469080 LRRC43Q8N309 656 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 IFT122Q9HBG6 1241 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 PRG3Q9Y2Y8 225 aaPredicted RBP12.73□□□□□ -0.37
USP11-206ENST00000469080 FADS3Q9Y5Q0 445 aa12.73□□□□□ -0.37
USP11-206ENST00000469080 FBP2O00757 339 aa12.72□□□□□ -0.37
USP11-206ENST00000469080 SOCS7O14512 581 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms