RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 GPD2P43304 727 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 HARS2P49590 506 aaKnown RBP10.62□□□□□ -0.71
SF3A3-204ENST00000462258 ELF2Q15723 593 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 CSRP2Q16527 193 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 PLK5Q496M5 336 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 USP39Q53GS9 565 aaKnown RBP10.62□□□□□ -0.71
SF3A3-204ENST00000462258 HSP90AA4PQ58FG1 418 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 DENND1BQ6P3S1 775 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 PRR23CQ6ZRP0 262 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 C11orf74Q86VG3 221 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 CHPFQ8IZ52 775 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 HMGB4Q8WW32 186 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 SHC3Q92529 594 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 LOXL4Q96JB6 756 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 ZC3H10Q96K80 434 aaKnown RBP10.62□□□□□ -0.71
SF3A3-204ENST00000462258 SPACA7Q96KW9 195 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 MIS12Q9H081 205 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 ARRDC1-AS1Q9H2J1 176 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 ACP6Q9NPH0 428 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 AJAP1Q9UKB5 411 aaPredicted RBP10.62□□□□□ -0.71
SF3A3-204ENST00000462258 CDV3Q9UKY7 258 aaKnown RBP10.62□□□□□ -0.71
SF3A3-204ENST00000462258 HCN2Q9UL51 889 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 STARD13Q9Y3M8 1113 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.62□□□□□ -0.71
SF3A3-204ENST00000462258 CEP192Q8TEP8 1941 aa10.62□□□□□ -0.71
SF3A3-204ENST00000462258 PRR5-ARHGAP8B1AHC4 643 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 E5RJQ4 531 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 IGLV3-27P01718 113 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 CISD3P0C7P0 127 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 NCAM1P13591 858 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 BCKDHBP21953 392 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 NTSR1P30989 418 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 MPLP40238 635 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 WASP42768 502 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 ACADSBP45954 432 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 RPL34P49207 117 aaKnown RBP10.61□□□□□ -0.71
SF3A3-204ENST00000462258 ZNF445P59923 1031 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 ARHGAP8P85298 464 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 PDCLQ13371 301 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 PUM1Q14671 1186 aaKnown RBP eCLIP10.61□□□□□ -0.715e-6■□□□□ 10.2
SF3A3-204ENST00000462258 RSPO4Q2I0M5 234 aaPredicted RBP10.61□□□□□ -0.71
SF3A3-204ENST00000462258 MIIPQ5JXC2 388 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 ANKS1BQ7Z6G8 1248 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 OLIG1Q8TAK6 271 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 GPT2Q8TD30 523 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 DQX1Q8TE96 717 aaKnown RBP10.61□□□□□ -0.71
SF3A3-204ENST00000462258 DDI1Q8WTU0 396 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 ZNF606Q8WXB4 792 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 FAM149B1Q96BN6 582 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 TUBGCP2Q9BSJ2 902 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 DUSP15Q9H1R2 295 aaPredicted RBP10.61□□□□□ -0.71
SF3A3-204ENST00000462258 NDST4Q9H3R1 872 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 SIX2Q9NPC8 291 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 DLL3Q9NYJ7 618 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 FBXO10Q9UK96 956 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 INVSQ9Y283 1065 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 SLC27A6Q9Y2P4 619 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 PCDHGA5Q9Y5G8 931 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 SDK1Q7Z5N4 2213 aa10.61□□□□□ -0.71
SF3A3-204ENST00000462258 KCNJ18B7U540 433 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 GOLGA6L22H0YM25 854 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 PES1O00541 588 aaKnown RBP10.6□□□□□ -0.71
SF3A3-204ENST00000462258 FOXD2O60548 495 aaPredicted RBP10.6□□□□□ -0.71
SF3A3-204ENST00000462258 RHOBTB1O94844 696 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 SDHBP21912 280 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 HOXD9P28356 352 aaPredicted RBP10.6□□□□□ -0.71
SF3A3-204ENST00000462258 KCNJ12Q14500 433 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 CCDC6Q16204 474 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 GEN1Q17RS7 908 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 VWA3BQ502W6 1294 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 MPPE1Q53F39 396 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 CT47A1Q5JQC4 288 aaPredicted RBP10.6□□□□□ -0.71
SF3A3-204ENST00000462258 NUGGCQ68CJ6 796 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 PMS2CLQ68D20 193 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 SDE2Q6IQ49 451 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 ERMP1Q7Z2K6 904 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 PASD1Q8IV76 773 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 PGBD3Q8N328 593 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 NETO1Q8TDF5 533 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 STK32AQ8WU08 396 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 SERPINB11Q96P15 392 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 ACOX2Q99424 681 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 GABRG3Q99928 467 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 TRIM62Q9BVG3 475 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 SLC4A5Q9BY07 1137 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 SAMSN1Q9NSI8 373 aaKnown RBP10.6□□□□□ -0.71
SF3A3-204ENST00000462258 CACNA2D2Q9NY47 1150 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 CALCOCO1Q9P1Z2 691 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 CYTH4Q9UIA0 394 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 STOML2Q9UJZ1 356 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 NFE2L3Q9Y4A8 694 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 RAD54BQ9Y620 910 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 ABCA7Q8IZY2 2146 aa10.6□□□□□ -0.71
SF3A3-204ENST00000462258 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.59□□□□□ -0.71
SF3A3-204ENST00000462258 A0A1W2PQF6 199 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 CAPN9O14815 690 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 PAPSS1O43252 624 aaPredicted RBP10.59□□□□□ -0.71
SF3A3-204ENST00000462258 TSPAN3O60637 253 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 FYNP06241 537 aa10.59□□□□□ -0.71
SF3A3-204ENST00000462258 PNMA6AP0CW24 399 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms