RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 GSDMBQ8TAX9 411 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 PIWIL2Q8TC59 973 aaKnown RBP12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 KCNN1Q92952 543 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 CDHR1Q96JP9 859 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 NGRNQ9NPE2 291 aaKnown RBP12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 KCNG1Q9UIX4 513 aa12.13□□□□□ -0.47
PDZRN3-203ENST00000462146 TRDMT1O14717 391 aaKnown RBP12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 TPP1O14773 563 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 APOL1O14791 398 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 PRPSAP2O60256 369 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 FKBP6O75344 327 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 ALDOAP04075 364 aaKnown RBP12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 ITGB3P05106 788 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 TFE3P19532 575 aaPredicted RBP12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 UBA1P22314 1058 aaKnown RBP12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 L1CAMP32004 1257 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 SLC1A6P48664 564 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 GRM1Q13255 1194 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 TFDP2Q14188 446 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 FAM47CQ5HY64 1035 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 ACAD11Q709F0 780 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 MARK2Q7KZI7 788 aaKnown RBP12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 GDPD5Q8WTR4 605 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 ZBED3Q96IU2 234 aaPredicted RBP12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 ANKRD36BP1Q96IX9 119 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 OXCT2Q9BYC2 517 aaPredicted RBP12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 BCO2Q9BYV7 579 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 CSDE1O75534 798 aaKnown RBP12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 ATXN1P54253 815 aaKnown RBP12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 GBE1Q04446 702 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 LAMTOR4Q0VGL1 99 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 SLC10A2Q12908 348 aaPredicted RBP12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 HNRNPDQ14103 355 aaKnown RBP12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 PCLAFQ15004 111 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 CCDC14Q49A88 953 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 WDR78Q5VTH9 848 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 SATL1Q86VE3 508 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 PHTF2Q8N3S3 785 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 RTP4Q96DX8 246 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 SORT1Q99523 831 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 EBNA1BP2Q99848 306 aaKnown RBP12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 PCDH18Q9HCL0 1135 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 MYOZ2Q9NPC6 264 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 ZNF358Q9NW07 568 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 BTBD7Q9P203 1132 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 DNAJB4Q9UDY4 337 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 CDH22Q9UJ99 828 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 MFHAS1Q9Y4C4 1052 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 PSAT1Q9Y617 370 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 DOCK1Q14185 1865 aa12.12□□□□□ -0.47
PDZRN3-203ENST00000462146 WDR27A2RRH5 827 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 TXNDC9O14530 226 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 PRKCGP05129 697 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 MAGEA3P43357 314 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 GABRB2P47870 512 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 PDE1CQ14123 709 aaPredicted RBP12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 PPM1JQ5JR12 505 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 EEPD1Q7L9B9 569 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 C10orf107Q8IVU9 208 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 WDR75Q8IWA0 830 aaKnown RBP12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 DEFB107AQ8IZN7 70 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 C12orf29Q8N999 325 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 TRAPPC12Q8WVT3 735 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 TMEM176AQ96HP8 235 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 HEXIM2Q96MH2 286 aaKnown RBP12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 CNPY3Q9BT09 278 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 SNRNP25Q9BV90 132 aaKnown RBP12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 DMAP1Q9NPF5 467 aaPredicted RBP12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 TBC1D30Q9Y2I9 924 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 SF3B1O75533 1304 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 IGKV6D-21A0A0A0MT36 114 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 BIRC5O15392 142 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 CILPO75339 1184 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 MAFO75444 373 aaPredicted RBP12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 RAG1P15918 1043 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 COPAP53621 1224 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 BACE1P56817 501 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 TBCCQ15814 346 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 SLC5A9Q2M3M2 681 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 PRAMEF18Q5VWM3 479 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 FRMD7Q6ZUT3 714 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 NLRP4Q96MN2 994 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 NDNQ99608 321 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 ACAD9Q9H845 621 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 MAN1C1Q9NR34 630 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 PCDHGB4Q9UN71 923 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 PCDHGB5Q9Y5G0 923 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 PCDHA11Q9Y5I1 949 aa12.11□□□□□ -0.47
PDZRN3-203ENST00000462146 CCNT2O60583 730 aaKnown RBP12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 PGM3O95394 542 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 UQCRBP14927 111 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 NCF2P19878 526 aaPredicted RBP12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 ITGAXP20702 1163 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 SERPINB6P35237 376 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 IDH3AP50213 366 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 STAT5BP51692 787 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 MED21Q13503 144 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 TRIP10Q15642 601 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 TMEM132AQ24JP5 1023 aa12.1□□□□□ -0.47
PDZRN3-203ENST00000462146 NBPF12Q5TAG4 269 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms