RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 KIAA1257Q9ULG3 409 aa21.73■■□□□ 1.07
CPNE1-219ENST00000440240 SLC12A8A0AV02 714 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 GOLGA6L4A6NEF3 574 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 XPO1O14980 1071 aaKnown RBP21.72■■□□□ 1.07
CPNE1-219ENST00000440240 TIMM44O43615 452 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 SMC2O95347 1197 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 PROS1P07225 676 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 SYPP08247 313 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 SEMA3BQ13214 749 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 CUL2Q13617 745 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 GEN1Q17RS7 908 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 CBWD6Q4V339 395 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 CBWD3Q5JTY5 395 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 CBWD5Q5RIA9 395 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 KIAA1324Q6UXG2 1013 aaKnown RBP21.72■■□□□ 1.07
CPNE1-219ENST00000440240 SLC41A1Q8IVJ1 513 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 FMR1NBQ8N0W7 255 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-219ENST00000440240 DDI1Q8WTU0 396 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 PLD4Q96BZ4 506 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 ERLEC1Q96DZ1 483 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 P2RY11Q96G91 374 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 HSPA12BQ96MM6 686 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 GTPBP2Q9BX10 602 aaKnown RBP21.72■■□□□ 1.07
CPNE1-219ENST00000440240 PRDM16Q9HAZ2 1276 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 LRRC4Q9HBW1 653 aa21.72■■□□□ 1.07
CPNE1-219ENST00000440240 PCNX2A6NKB5 2137 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 ARHGAP33O14559 1287 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 HARS2P49590 506 aaKnown RBP21.71■■□□□ 1.07
CPNE1-219ENST00000440240 BCAT1P54687 386 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 LRRC63Q05C16 580 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 PDE4CQ08493 712 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 ENPP2Q13822 863 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 EIF4HQ15056 248 aaKnown RBP21.71■■□□□ 1.07
CPNE1-219ENST00000440240 GOLGA7BQ2TAP0 167 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 FUT11Q495W5 492 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 WDR45BQ5MNZ6 344 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 ANKRD40Q6AI12 368 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 ANKS1BQ7Z6G8 1248 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 RGL4Q8IZJ4 473 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 RNF139Q8WU17 664 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 PIWIL1Q96J94 861 aaKnown RBP21.71■■□□□ 1.07
CPNE1-219ENST00000440240 IPO9Q96P70 1041 aaKnown RBP21.71■■□□□ 1.07
CPNE1-219ENST00000440240 ULBP1Q9BZM6 244 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 SLC6A17Q9H1V8 727 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 ELOVL2Q9NXB9 296 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 SUSD2Q9UGT4 822 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 ARMCX3Q9UH62 379 aaPredicted RBP21.71■■□□□ 1.07
CPNE1-219ENST00000440240 TSPAN16Q9UKR8 245 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 WASF3Q9UPY6 502 aa21.71■■□□□ 1.07
CPNE1-219ENST00000440240 TNRC6BQ9UPQ9 1833 aaKnown RBP21.71■■□□□ 1.07
CPNE1-219ENST00000440240 SYNCRIPO60506 623 aaKnown RBP21.7■■□□□ 1.06
CPNE1-219ENST00000440240 OPHN1O60890 802 aa21.7■■□□□ 1.06
CPNE1-219ENST00000440240 GNSP15586 552 aa21.7■■□□□ 1.06
CPNE1-219ENST00000440240 TBXAS1P24557 533 aaPredicted RBP21.7■■□□□ 1.06
CPNE1-219ENST00000440240 CD6P30203 668 aa21.7■■□□□ 1.06
CPNE1-219ENST00000440240 BST2Q10589 180 aaKnown RBP21.7■■□□□ 1.06
CPNE1-219ENST00000440240 TRIP4Q15650 581 aaPredicted RBP21.7■■□□□ 1.06
CPNE1-219ENST00000440240 MPPE1Q53F39 396 aa21.7■■□□□ 1.06
CPNE1-219ENST00000440240 PIP4P1Q86T03 277 aa21.7■■□□□ 1.06
CPNE1-219ENST00000440240 FAM217AQ8IXS0 508 aa21.7■■□□□ 1.06
CPNE1-219ENST00000440240 ZC3H3Q8IXZ2 948 aaKnown RBP21.7■■□□□ 1.06
CPNE1-219ENST00000440240 ITM2CQ9NQX7 267 aa21.7■■□□□ 1.06
CPNE1-219ENST00000440240 HOOK1Q9UJC3 728 aaKnown RBP21.7■■□□□ 1.06
CPNE1-219ENST00000440240 HBS1LQ9Y450 684 aaKnown RBP21.7■■□□□ 1.06
CPNE1-219ENST00000440240 CHD6Q8TD26 2715 aa21.7■■□□□ 1.06
CPNE1-219ENST00000440240 CACNA1EQ15878 2313 aa21.69■■□□□ 1.06
CPNE1-219ENST00000440240 VDRP11473 427 aa21.69■■□□□ 1.06
CPNE1-219ENST00000440240 CD19P15391 556 aa21.69■■□□□ 1.06
CPNE1-219ENST00000440240 IL12RB1P42701 662 aa21.69■■□□□ 1.06
CPNE1-219ENST00000440240 ZNF445P59923 1031 aa21.69■■□□□ 1.06
CPNE1-219ENST00000440240 BSPRYQ5W0U4 402 aa21.69■■□□□ 1.06
CPNE1-219ENST00000440240 UNQ6494/PRO21346Q6UXR6 183 aa21.69■■□□□ 1.06
CPNE1-219ENST00000440240 TMPRSS6Q8IU80 811 aa21.69■■□□□ 1.06
CPNE1-219ENST00000440240 SPATA20Q8TB22 786 aa21.69■■□□□ 1.06
CPNE1-219ENST00000440240 SMARCE1Q969G3 411 aa21.69■■□□□ 1.06
CPNE1-219ENST00000440240 MKRN2Q9H000 416 aaKnown RBP21.69■■□□□ 1.06
CPNE1-219ENST00000440240 METTL14Q9HCE5 456 aaKnown RBP21.69■■□□□ 1.06
CPNE1-219ENST00000440240 FSCN3Q9NQT6 498 aa21.69■■□□□ 1.06
CPNE1-219ENST00000440240 FRYQ5TBA9 3013 aa21.69■■□□□ 1.06
CPNE1-219ENST00000440240 TULP2O00295 520 aa21.68■■□□□ 1.06
CPNE1-219ENST00000440240 SETSIPP0DME0 302 aa21.68■■□□□ 1.06
CPNE1-219ENST00000440240 OXTRP30559 389 aa21.68■■□□□ 1.06
CPNE1-219ENST00000440240 RDXP35241 583 aaKnown RBP21.68■■□□□ 1.06
CPNE1-219ENST00000440240 ARID5AQ03989 594 aa21.68■■□□□ 1.06
CPNE1-219ENST00000440240 HNRNPDQ14103 355 aaKnown RBP21.68■■□□□ 1.06
CPNE1-219ENST00000440240 ZNF234Q14588 700 aa21.68■■□□□ 1.06
CPNE1-219ENST00000440240 PLEKHG6Q3KR16 790 aa21.68■■□□□ 1.06
CPNE1-219ENST00000440240 FMNL3Q8IVF7 1028 aa21.68■■□□□ 1.06
CPNE1-219ENST00000440240 SIX6OS1Q8N1H7 587 aa21.68■■□□□ 1.06
CPNE1-219ENST00000440240 MINDY1Q8N5J2 469 aa21.68■■□□□ 1.06
CPNE1-219ENST00000440240 CADM4Q8NFZ8 388 aa21.68■■□□□ 1.06
CPNE1-219ENST00000440240 KCTD13Q8WZ19 329 aa21.68■■□□□ 1.06
CPNE1-219ENST00000440240 NDRG1Q92597 394 aaKnown RBP21.68■■□□□ 1.06
CPNE1-219ENST00000440240 PRCCQ92733 491 aaPredicted RBP21.68■■□□□ 1.06
CPNE1-219ENST00000440240 SLC35C1Q96A29 364 aa21.68■■□□□ 1.06
CPNE1-219ENST00000440240 TOE1Q96GM8 510 aaKnown RBP21.68■■□□□ 1.06
CPNE1-219ENST00000440240 CIPCQ9C0C6 399 aa21.68■■□□□ 1.06
CPNE1-219ENST00000440240 ABCC13Q9NSE7 274 aa21.68■■□□□ 1.06
CPNE1-219ENST00000440240 DNAAF2Q9NVR5 837 aaKnown RBP21.68■■□□□ 1.06
CPNE1-219ENST00000440240 WSB2Q9NYS7 404 aaPredicted RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms