RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 KELP23276 732 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 ATP5F1P24539 256 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 PDIA3P30101 505 aaKnown RBP5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 IDUAP35475 653 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 IGHMBP2P38935 993 aaKnown RBP5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 TECP42680 631 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 SEMA3BQ13214 749 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 STARD3Q14849 445 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 EZH2Q15910 746 aaKnown RBP5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 SRSF7Q16629 238 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 GGT6Q6P531 493 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 KYAT3Q6YP21 454 aaKnown RBP5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 SPICE1Q8N0Z3 855 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 NGDNQ8NEJ9 315 aaKnown RBP5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 OSR1Q8TAX0 266 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 SLC22A17Q8WUG5 538 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 NPIPB3Q92617 1050 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 HIC2Q96JB3 615 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 ZNF778Q96MU6 729 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 NUDT22Q9BRQ3 303 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 CRB3Q9BUF7 120 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 TM2D2Q9BX73 214 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 ADGRE3Q9BY15 652 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 SEMA4CQ9C0C4 833 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 CDCP1Q9H5V8 836 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 OBP2BQ9NPH6 170 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 RXFP3Q9NSD7 469 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 PCDHB7Q9Y5E2 793 aa5.17□□□□□ -1.58
HMGB1P49-201ENST00000418882 PNMA6EA0A0J9YXQ4 647 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 LGALS16A8MUM7 142 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 KCNU1A8MYU2 1149 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 NPC1O15118 1278 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 SETSIPP0DME0 302 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 NPPBP16860 134 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 NDUFS1P28331 727 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 THBS4P35443 961 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 ZNF268Q14587 947 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 ELF2Q15723 593 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 P3H1Q32P28 736 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 Q4G0T1 1027 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 CC2D1BQ5T0F9 858 aaKnown RBP5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 ARL6IP4Q66PJ3 421 aaKnown RBP5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 LIN54Q6MZP7 749 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 MIS18BP1Q6P0N0 1132 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 ACSM6Q6P461 480 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 VSTM1Q6UX27 236 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 MPHOSPH6Q99547 160 aaKnown RBP5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 ELOVL1Q9BW60 279 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 PRSS22Q9GZN4 317 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 ARFGAP3Q9NP61 516 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 ZNF70Q9UC06 446 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 CA14Q9ULX7 337 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 BTBD3Q9Y2F9 522 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 TNFRSF18Q9Y5U5 241 aa5.16□□□□□ -1.58
HMGB1P49-201ENST00000418882 CYP2D7A0A087X1C5 515 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 LOC105369274A0A096LPK9 316 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 LOC102723532A0A0G2JNH3 316 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 ADAM10O14672 748 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 RPP40O75818 363 aaKnown RBP5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 KAT7O95251 611 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 CER1O95813 267 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 GLP2RO95838 553 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 HOXD9P28356 352 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 GSTM5P46439 218 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 RHBDL3P58872 404 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 CFHR1Q03591 330 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 BTKQ06187 659 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 C4orf46Q504U0 113 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 C1QL2Q7Z5L3 287 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 CNGA4Q8IV77 575 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 OR4N4Q8N0Y3 316 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 ACRBPQ8NEB7 543 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 WIPF2Q8TF74 440 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 OVCA2Q8WZ82 227 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 AKAP1Q92667 903 aaKnown RBP eCLIP5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 PRPF18Q99633 342 aaKnown RBP5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 PAAF1Q9BRP4 392 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 HELLSQ9NRZ9 838 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 ZNF804BA4D1E1 1349 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 SPATA31A1Q5TZJ5 1347 aa5.15□□□□□ -1.59
HMGB1P49-201ENST00000418882 E5RJQ4 531 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 DNPH1O43598 174 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 TOP3BO95985 862 aaKnown RBP5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 GYS1P13807 737 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 DUSP1P28562 367 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 STAT6P42226 847 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 AGTR2P50052 363 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 FAM3BP58499 235 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 HDAC1Q13547 482 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 SPARCL1Q14515 664 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 ETFDHQ16134 617 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 TUBB8Q3ZCM7 444 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 PAPD7Q5XG87 772 aaKnown RBP5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 RFX6Q8HWS3 928 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 VPS37AQ8NEZ2 397 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 OR52L2PQ8NGH6 319 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 GLMPQ8WWB7 406 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 PCGF6Q9BYE7 350 aa5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 SPRTNQ9H040 489 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P49-201ENST00000418882 NUAK2Q9H093 628 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms