RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 F8VZ95 297 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 NPC1O15118 1278 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 OIP5O43482 229 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 ERLIN1O75477 346 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 FSBPO95073 299 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 IGHA1P01876 353 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 OR52Z1P0C646 297 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 MAPTP10636 758 aaKnown RBP4.81□□□□□ -1.64
SF3B1-202ENST00000409915 CKBP12277 381 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 ZNF24P17028 368 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 MC4RP32245 332 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 SERPINF1P36955 418 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 THPOP40225 353 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 MAP2K3P46734 347 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 FNTAP49354 379 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 CLCN3P51790 818 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 JAK3P52333 1124 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 RNASE9P60153 205 aaKnown RBP4.81□□□□□ -1.64
SF3B1-202ENST00000409915 ADAM17P78536 824 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 GPLD1P80108 840 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 CREMQ03060 361 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 CCDC15Q0P6D6 951 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 TMEM62Q0P6H9 643 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 RESTQ13127 1097 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 MAPK7Q13164 816 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 BFSP2Q13515 415 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 DAG1Q14118 895 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 CTTNQ14247 550 aaKnown RBP4.81□□□□□ -1.64
SF3B1-202ENST00000409915 ERV3-1Q14264 604 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 E2F5Q15329 346 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 SHHQ15465 462 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 TCTN1Q2MV58 587 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 TRIM71Q2Q1W2 868 aaKnown RBP4.81□□□□□ -1.64
SF3B1-202ENST00000409915 ARL13BQ3SXY8 428 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 MARCH8Q5T0T0 291 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 ZNF618Q5T7W0 954 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 KLHDC7AQ5VTJ3 777 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 FAM109BQ6ICB4 259 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-202ENST00000409915 MFSD5Q6N075 450 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 RSPO2Q6UXX9 243 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-202ENST00000409915 FRMD7Q6ZUT3 714 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 C16orf59Q7L2K0 433 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 PLPPR4Q7Z2D5 763 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 DNAJB7Q7Z6W7 309 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-202ENST00000409915 SERINC5Q86VE9 423 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 MOGAT3Q86VF5 341 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 IQCF2Q8IXL9 164 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 CCDC170Q8IYT3 715 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 LRRC71Q8N4P6 559 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 RNF152Q8N8N0 203 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 NAT8LQ8N9F0 302 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 GALNT6Q8NCL4 622 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 OR10H5Q8NGA6 315 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 MIPOL1Q8TD10 442 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 ATP8B4Q8TF62 1192 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 HERVK_113Q902F9 699 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 EZH1Q92800 747 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-202ENST00000409915 KCNN1Q92952 543 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 ATP2A3Q93084 1043 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 ZNF566Q969W8 418 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 C18orf8Q96DM3 657 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 VWCEQ96DN2 955 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 DTNBP1Q96EV8 351 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 INTS4Q96HW7 963 aaKnown RBP4.81□□□□□ -1.64
SF3B1-202ENST00000409915 DYDC2Q96IM9 177 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 ZNF668Q96K58 619 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-202ENST00000409915 FAM20AQ96MK3 541 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 MTMR9Q96QG7 549 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 OSBPL9Q96SU4 736 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 ELF4Q99607 663 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-202ENST00000409915 DPH2Q9BQC3 489 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-202ENST00000409915 LXNQ9BS40 222 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 BOCQ9BWV1 1114 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 STK33Q9BYT3 514 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 PRO3102Q9H379 93 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-202ENST00000409915 WDR35Q9P2L0 1181 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 ATXN7L1Q9ULK2 861 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-202ENST00000409915 ARHGAP26Q9UNA1 814 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 MTMR6Q9Y217 621 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 ZNF711Q9Y462 761 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 TANC1Q9C0D5 1861 aa4.81□□□□□ -1.64
SF3B1-202ENST00000409915 SCN5AQ14524 2016 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 TRIP12Q14669 1992 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-202ENST00000409915 SZT2Q5T011 3432 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 NRCAMQ92823 1304 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 MBLAC1A4D2B0 266 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-202ENST00000409915 SOX1O00570 391 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-202ENST00000409915 MSTNO14793 375 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 EFSO43281 561 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 STX6O43752 255 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 HBP1O60381 514 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 MED24O75448 989 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 B3GALNT1O75752 331 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 STBD1O95210 358 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 IL18RAPO95256 599 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 TGDSO95455 350 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 C22orf31O95567 290 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 SLC4A1P02730 911 aa4.8□□□□□ -1.64
SF3B1-202ENST00000409915 VTNP04004 478 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms