RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CLDN10P78369 228 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 IRX1P78414 480 aaPredicted RBP13.83□□□□□ -0.2
COL6A2-204ENST00000409416 SLC25A11Q02978 314 aaKnown RBP13.83□□□□□ -0.2
COL6A2-204ENST00000409416 THOC5Q13769 683 aaKnown RBP13.83□□□□□ -0.2
COL6A2-204ENST00000409416 LRRC38Q5VT99 294 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 ILDR2Q71H61 639 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 NUDCD3Q8IVD9 361 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 MTMR14Q8NCE2 650 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 DCAKDQ8WVC6 231 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 NSL1Q96IY1 281 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 SRPK1Q96SB4 655 aaKnown RBP13.83□□□□□ -0.2
COL6A2-204ENST00000409416 WDR83Q9BRX9 315 aaKnown RBP13.83□□□□□ -0.2
COL6A2-204ENST00000409416 AP5M1Q9H0R1 490 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 AP4E1Q9UPM8 1137 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 FCHO1O14526 889 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 LGR5O75473 907 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 OR4Q2P0C623 313 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 TPBGLP0DKB5 382 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 PGM1P36871 562 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 SKIV2L2P42285 1042 aaKnown RBP13.83□□□□□ -0.2
COL6A2-204ENST00000409416 TDRPQ86YL5 185 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 TNS4Q8IZW8 715 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 CCDC185Q8N715 623 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 BEST2Q8NFU1 509 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 MIPEPQ99797 713 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 CADM1Q9BY67 442 aaKnown RBP13.83□□□□□ -0.2
COL6A2-204ENST00000409416 KLC2Q9H0B6 622 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 MAN1C1Q9NR34 630 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 ZNF358Q9NW07 568 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 DDIT4Q9NX09 232 aa13.83□□□□□ -0.2
COL6A2-204ENST00000409416 CXorf49A8MYA2 514 aaPredicted RBP13.82□□□□□ -0.2
COL6A2-204ENST00000409416 PAPSS1O43252 624 aaPredicted RBP13.82□□□□□ -0.2
COL6A2-204ENST00000409416 LUC7L3O95232 432 aaKnown RBP13.82□□□□□ -0.2
COL6A2-204ENST00000409416 TCN1P20061 433 aaPredicted RBP13.82□□□□□ -0.2
COL6A2-204ENST00000409416 ABCD1P33897 745 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 SERPINB4P48594 390 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 POU5F1BQ06416 359 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 CCDC15Q0P6D6 951 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 SLC45A4Q5BKX6 768 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 ADGRD1Q6QNK2 874 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 ZPBP2Q6X784 338 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 RELL1Q8IUW5 271 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 CCNYL1Q8N7R7 359 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 APPL2Q8NEU8 664 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 CLPTM1LQ96KA5 538 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 NMUR2Q9GZQ4 415 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 ABT1Q9ULW3 272 aaKnown RBP13.82□□□□□ -0.2
COL6A2-204ENST00000409416 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.82□□□□□ -0.2
COL6A2-204ENST00000409416 NFASCO94856 1347 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 CCL22O00626 93 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 C2CD2LO14523 706 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 ENDOD1O94919 500 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 SMPD1P17405 629 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 ETFBP38117 255 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 ZNF157P51786 506 aaPredicted RBP13.82□□□□□ -0.2
COL6A2-204ENST00000409416 RASA2Q15283 850 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 PPM1JQ5JR12 505 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 RINLQ6ZS11 566 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 CDHR3Q6ZTQ4 885 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 CMC1Q7Z7K0 106 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 BANPQ8N9N5 519 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 SNX31Q8N9S9 440 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 THTPAQ9BU02 230 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 CAB39LQ9H9S4 337 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 RRAGCQ9HB90 399 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 DLGAP2Q9P1A6 1054 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 FARP1Q9Y4F1 1045 aaPredicted RBP13.82□□□□□ -0.2
COL6A2-204ENST00000409416 STYXL1Q9Y6J8 313 aa13.82□□□□□ -0.2
COL6A2-204ENST00000409416 COL2A1P02458 1487 aaPredicted RBP13.82□□□□□ -0.2
COL6A2-204ENST00000409416 TTC24A2A3L6 582 aaPredicted RBP13.81□□□□□ -0.2
COL6A2-204ENST00000409416 APOC4-APOC2K7ER74 178 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 NVLO15381 856 aaKnown RBP13.81□□□□□ -0.2
COL6A2-204ENST00000409416 PMPCBO75439 489 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 KRT37O76014 449 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 APOC2P02655 101 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 MGAT1P26572 445 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 ZNF132P52740 706 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 TMEM154Q6P9G4 183 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 PPFIBP2Q8ND30 876 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 FBXO41Q8TF61 875 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 INPP5DQ92835 1189 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 ZBED3Q96IU2 234 aaPredicted RBP13.81□□□□□ -0.2
COL6A2-204ENST00000409416 TBCBQ99426 244 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 COMMD10Q9Y6G5 202 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 ASB14A6NK59 587 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 ABL2P42684 1182 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 PARP6Q2NL67 630 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 DRICH1Q6PGQ1 229 aaPredicted RBP13.81□□□□□ -0.2
COL6A2-204ENST00000409416 FASTKD5Q7L8L6 764 aaKnown RBP13.81□□□□□ -0.2
COL6A2-204ENST00000409416 TTC30AQ86WT1 665 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 ZNF669Q96BR6 464 aaPredicted RBP13.81□□□□□ -0.2
COL6A2-204ENST00000409416 ZCWPW1Q9H0M4 648 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 TNPO2O14787 897 aaKnown RBP13.81□□□□□ -0.2
COL6A2-204ENST00000409416 YBX3P16989 372 aaKnown RBP eCLIP13.81□□□□□ -0.2
COL6A2-204ENST00000409416 TYK2P29597 1187 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 TFDP2Q14188 446 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 TFAP2DQ7Z6R9 452 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 MIB1Q86YT6 1006 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 SMC1BQ8NDV3 1235 aa13.81□□□□□ -0.2
COL6A2-204ENST00000409416 PPP4R1Q8TF05 950 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms