RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CLEC11AQ9Y240 323 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.41■□□□□ 0.38
NUP50-203ENST00000407019 DAB1O75553 588 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 KRT38O76015 456 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 TGDSO95455 350 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 CSH1P0DML2 217 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 CSH2P0DML3 217 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 T-ENOLP0DO92 83 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 WARSP23381 471 aaKnown RBP17.41■□□□□ 0.38
NUP50-203ENST00000407019 CCNFP41002 786 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 SERPINB4P48594 390 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 RASSF2P50749 326 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 SLC25A52Q3SY17 297 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 BZW1Q7L1Q6 419 aaKnown RBP17.41■□□□□ 0.38
NUP50-203ENST00000407019 MTDHQ86UE4 582 aaKnown RBP17.41■□□□□ 0.38
NUP50-203ENST00000407019 PIGZQ86VD9 579 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 FAM131BQ86XD5 332 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 PYROXD2Q8N2H3 581 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 B3GALNT2Q8NCR0 500 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 HTR3CQ8WXA8 447 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 UTP4Q969X6 686 aaKnown RBP17.41■□□□□ 0.38
NUP50-203ENST00000407019 MTBPQ96DY7 904 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 OLFM3Q96PB7 478 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 SYT17Q9BSW7 474 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 MFHAS1Q9Y4C4 1052 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 PCDHA11Q9Y5I1 949 aa17.41■□□□□ 0.38
NUP50-203ENST00000407019 FAM159BA6NKW6 160 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 IL1BP01584 269 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 CCND1P24385 295 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 PSEN2P49810 448 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 SLC8A3P57103 927 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 ADAM17P78536 824 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 SARNPP82979 210 aaKnown RBP17.4■□□□□ 0.38
NUP50-203ENST00000407019 ADIGQ0VDE8 80 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 DENND5BQ6ZUT9 1274 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 OSTM1Q86WC4 334 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 PSTKQ8IV42 348 aaKnown RBP17.4■□□□□ 0.38
NUP50-203ENST00000407019 MPP5Q8N3R9 675 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 TOP6BLQ8N6T0 577 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 HNRNPABQ99729 332 aaKnown RBP17.4■□□□□ 0.38
NUP50-203ENST00000407019 PRDM16Q9HAZ2 1276 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 SAR1AQ9NR31 198 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 MKS1Q9NXB0 559 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 A0A0A0MRY4 1105 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 A0A0G2JND7 137 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 KLF11O14901 512 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 UGT1A9O60656 530 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 WFS1O76024 890 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 CBX6O95503 412 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 VAV1P15498 845 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 FDFT1P37268 417 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 TRMT10BQ6PF06 316 aaKnown RBP17.4■□□□□ 0.38
NUP50-203ENST00000407019 CDHR3Q6ZTQ4 885 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 CLNKQ7Z7G1 428 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 FBXO41Q8TF61 875 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 SLC7A6OSQ96CW6 309 aaPredicted RBP17.4■□□□□ 0.38
NUP50-203ENST00000407019 SPATA13Q96N96 652 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 DUSP16Q9BY84 665 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 UGT1A7Q9HAW7 530 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 UGT1A10Q9HAW8 530 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 UGT1A8Q9HAW9 530 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 IPPQ9Y573 584 aa17.4■□□□□ 0.38
NUP50-203ENST00000407019 ZNF236Q9UL36 1845 aa17.39■□□□□ 0.38
NUP50-203ENST00000407019 H3BRJ5 948 aa17.39■□□□□ 0.37
NUP50-203ENST00000407019 TREHO43280 583 aa17.39■□□□□ 0.37
NUP50-203ENST00000407019 MFSD11O43934 449 aa17.39■□□□□ 0.37
NUP50-203ENST00000407019 RFPL1O75677 317 aa17.39■□□□□ 0.37
NUP50-203ENST00000407019 SERPINB9P50453 376 aa17.39■□□□□ 0.37
NUP50-203ENST00000407019 ARFIP2P53365 341 aa17.39■□□□□ 0.37
NUP50-203ENST00000407019 LILRA4P59901 499 aa17.39■□□□□ 0.37
NUP50-203ENST00000407019 BMPR2Q13873 1038 aa17.39■□□□□ 0.37
NUP50-203ENST00000407019 ANKRD20A2Q5SQ80 823 aa17.39■□□□□ 0.37
NUP50-203ENST00000407019 ANKRD20A1Q5TYW2 823 aa17.39■□□□□ 0.37
NUP50-203ENST00000407019 ANKRD20A3Q5VUR7 823 aa17.39■□□□□ 0.37
NUP50-203ENST00000407019 TRIM42Q8IWZ5 723 aa17.39■□□□□ 0.37
NUP50-203ENST00000407019 HACE1Q8IYU2 909 aa17.39■□□□□ 0.37
NUP50-203ENST00000407019 NDRG1Q92597 394 aaKnown RBP17.39■□□□□ 0.37
NUP50-203ENST00000407019 LENG1Q96BZ8 264 aaPredicted RBP17.39■□□□□ 0.37
NUP50-203ENST00000407019 TRIM56Q9BRZ2 755 aaKnown RBP17.39■□□□□ 0.37
NUP50-203ENST00000407019 TACO1Q9BSH4 297 aaKnown RBP17.39■□□□□ 0.37
NUP50-203ENST00000407019 ARHGEF4Q9NR80 690 aa17.39■□□□□ 0.37
NUP50-203ENST00000407019 MCM8Q9UJA3 840 aa17.39■□□□□ 0.37
NUP50-203ENST00000407019 MTO1Q9Y2Z2 717 aaKnown RBP17.39■□□□□ 0.37
NUP50-203ENST00000407019 PLLPQ9Y342 182 aa17.39■□□□□ 0.37
NUP50-203ENST00000407019 HNRNPCL1O60812 293 aaKnown RBP17.38■□□□□ 0.37
NUP50-203ENST00000407019 GRIA1P42261 906 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 CRYBB1P53674 252 aaPredicted RBP17.38■□□□□ 0.37
NUP50-203ENST00000407019 IRF5Q13568 498 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 NBPF20Q3BBV1 942 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 DCAF6Q58WW2 860 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 OLFML2BQ68BL8 750 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 DEPDC1BQ8WUY9 529 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 STAMBPL1Q96FJ0 436 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 L3MBTL1Q9Y468 752 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 SCN4AP35499 1836 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 HAS3O00219 553 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 TRAFD1O14545 582 aaPredicted RBP17.38■□□□□ 0.37
NUP50-203ENST00000407019 STK10O94804 968 aaKnown RBP17.38■□□□□ 0.37
NUP50-203ENST00000407019 MLNP12872 115 aa17.38■□□□□ 0.37
NUP50-203ENST00000407019 NPR3P17342 541 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms