RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 ZNF778Q96MU6 729 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 SLC2A13Q96QE2 648 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 NPY6RQ99463 290 aa15.94■□□□□ 0.14
CPSF7-202ENST00000394888 H7C0C1 242 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 KLF11O14901 512 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 AMPD1P23109 780 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 ADORA2BP29275 332 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 ARRB2P32121 409 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 ATP5OP48047 213 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 LILRA4P59901 499 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 SCYL2Q6P3W7 929 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 NOTUMQ6P988 496 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 C3orf58Q8NDZ4 430 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 MCMBPQ9BTE3 642 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 WDR91A4D1P6 747 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 HHLA1C9JL84 531 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 MNAT1P51948 309 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 FAM110CQ1W6H9 321 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 PARP6Q2NL67 630 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 CTU1Q7Z7A3 348 aaKnown RBP15.93■□□□□ 0.14
CPSF7-202ENST00000394888 PALM2Q8IXS6 379 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 ZMIZ2Q8NF64 920 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 FAM111AQ96PZ2 611 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 LGMNQ99538 433 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 SIRPGQ9P1W8 387 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 LNPEPQ9UIQ6 1025 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 IPPQ9Y573 584 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 CYB561D2O14569 222 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 LCP1P13796 627 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 GNAZP19086 355 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 WARSP23381 471 aaKnown RBP15.93■□□□□ 0.14
CPSF7-202ENST00000394888 BCAT1P54687 386 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 OLIG2Q13516 323 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 KRT81Q14533 505 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 TAF1BQ53T94 588 aaPredicted RBP15.93■□□□□ 0.14
CPSF7-202ENST00000394888 FBXO41Q8TF61 875 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 CFAP36Q96G28 342 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 MANSC1Q9H8J5 431 aa15.93■□□□□ 0.14
CPSF7-202ENST00000394888 WDR6Q9NNW5 1121 aaKnown RBP15.93■□□□□ 0.14
CPSF7-202ENST00000394888 NRP1O14786 923 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 APOEP02649 317 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 BGNP21810 368 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 CTGFP29279 349 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 PPP6R3Q5H9R7 873 aaPredicted RBP15.92■□□□□ 0.14
CPSF7-202ENST00000394888 STRADAQ7RTN6 431 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 NLRP9Q7RTR0 991 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 SLC26A11Q86WA9 606 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 ZNF398Q8TD17 642 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 ZNF419Q96HQ0 510 aaPredicted RBP15.92■□□□□ 0.14
CPSF7-202ENST00000394888 EBNA1BP2Q99848 306 aaKnown RBP15.92■□□□□ 0.14
CPSF7-202ENST00000394888 PLCD4Q9BRC7 762 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 CRTAC1Q9NQ79 661 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 PLLPQ9Y342 182 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 DCAF8L1A6NGE4 600 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 A8MXQ7 604 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 DCLK1O15075 740 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 DNAJC6O75061 913 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 SNNO75324 88 aaPredicted RBP15.92■□□□□ 0.14
CPSF7-202ENST00000394888 APRTP07741 180 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 MATKP42679 507 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 CSRP3P50461 194 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 BMPR2Q13873 1038 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 CLEC20AQ6ZU45 233 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.92■□□□□ 0.144e-6■■■■■ 36.6
CPSF7-202ENST00000394888 OR6B3Q8NGW1 331 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 LRRC8CQ8TDW0 803 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 SRPK1Q96SB4 655 aaKnown RBP15.92■□□□□ 0.14
CPSF7-202ENST00000394888 PIGVQ9NUD9 493 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 XPO1O14980 1071 aaKnown RBP15.92■□□□□ 0.14
CPSF7-202ENST00000394888 LRPAP1P30533 357 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 GTF2A2P52657 109 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 CCNA1P78396 465 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 OCRLQ01968 901 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 MTDHQ86UE4 582 aaKnown RBP15.92■□□□□ 0.14
CPSF7-202ENST00000394888 PIGZQ86VD9 579 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 KLHL29Q96CT2 875 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 HNRNPABQ99729 332 aaKnown RBP15.92■□□□□ 0.14
CPSF7-202ENST00000394888 GCOM2Q9BZD3 368 aaPredicted RBP15.92■□□□□ 0.14
CPSF7-202ENST00000394888 PSAT1Q9Y617 370 aa15.92■□□□□ 0.14
CPSF7-202ENST00000394888 RRN3P2A6NIE6 340 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 PEX11AO75192 247 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 ALDOAP04075 364 aaKnown RBP15.91■□□□□ 0.14
CPSF7-202ENST00000394888 GMPRP36959 345 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 MFSD10Q14728 455 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 SLC25A52Q3SY17 297 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 CATSPER4Q7RTX7 472 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 TTC7BQ86TV6 843 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 ALKBH8Q96BT7 664 aaKnown RBP15.91■□□□□ 0.14
CPSF7-202ENST00000394888 RTP3Q9BQQ7 232 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 FBXO6Q9NRD1 293 aaPredicted RBP15.91■□□□□ 0.14
CPSF7-202ENST00000394888 PCDHA11Q9Y5I1 949 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 CFAP69A5D8W1 941 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 MYADML2A6NDP7 307 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 TRDMT1O14717 391 aaKnown RBP15.91■□□□□ 0.14
CPSF7-202ENST00000394888 LPXNO60711 386 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 GNL1P36915 607 aaPredicted RBP15.91■□□□□ 0.14
CPSF7-202ENST00000394888 TUBB3Q13509 450 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 SPRYD7Q5W111 196 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 CD300LGQ6UXG3 332 aa15.91■□□□□ 0.14
CPSF7-202ENST00000394888 CYS1Q717R9 158 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 219.3 ms