RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 THADAQ6YHU6 1953 aa18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 SLC30A4O14863 429 aa18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 GDF9O60383 454 aa18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 LATS1O95835 1130 aa18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 GABRG2P18507 467 aa18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 NTSR1P30989 418 aa18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 DENND1BQ6P3S1 775 aa18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 RSRC2Q7L4I2 434 aaKnown RBP18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 TRMT11Q7Z4G4 463 aaKnown RBP18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 SIX6OS1Q8N1H7 587 aa18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 NETO1Q8TDF5 533 aa18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 STK32AQ8WU08 396 aa18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 IPO9Q96P70 1041 aaKnown RBP18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 SLC4A5Q9BY07 1137 aa18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 UBE2TQ9NPD8 197 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 ACP6Q9NPH0 428 aa18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 RXFP3Q9NSD7 469 aa18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 MBD1Q9UIS9 605 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 LAMA1P25391 3075 aa18.79■□□□□ 0.6
TRAPPC3-202ENST00000373162 BCLAF3A2AJT9 711 aaKnown RBP18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 MSI1O43347 362 aaKnown RBP18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 FOXD2O60548 495 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 LTFP02788 710 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 LCP1P13796 627 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 PON1P27169 355 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 HOXD9P28356 352 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 MPLP40238 635 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 LIMK1P53667 647 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 SF3A2Q15428 464 aaKnown RBP18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 GEN1Q17RS7 908 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 USP39Q53GS9 565 aaKnown RBP18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 MIIPQ5JXC2 388 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 KIAA1211LQ6NV74 962 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 BEND5Q7L4P6 421 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 ENOSF1Q7L5Y1 443 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 C11orf74Q86VG3 221 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 FRMD1Q8N878 549 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 ZNF606Q8WXB4 792 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 BHMTQ93088 406 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 CRACR2AQ9BSW2 395 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 THAP9Q9H5L6 903 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 POLMQ9NP87 494 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 APEX2Q9UBZ4 518 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 INVSQ9Y283 1065 aa18.78■□□□□ 0.6
TRAPPC3-202ENST00000373162 TCRBV21S2A2A0A5A6 115 aa18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 PIK3R2O00459 728 aa18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 TM4SF5O14894 197 aa18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 FBXO21O94952 628 aa18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 C7P10643 843 aa18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 HOXB2P14652 356 aa18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 SDHBP21912 280 aa18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 ERCC5P28715 1186 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 RING1Q06587 406 aa18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 EIF4EBP2Q13542 120 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 CCDC6Q16204 474 aa18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 TMEM215Q68D42 235 aa18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 RBM43Q6ZSC3 357 aaKnown RBP18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 DGLUCYQ7Z3D6 616 aa18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 KIAA0907Q7Z7F0 614 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 RTKNQ9BST9 563 aa18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 SLC2A11Q9BYW1 496 aa18.77■□□□□ 0.6
TRAPPC3-202ENST00000373162 PAPSS1O43252 624 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 ALDH1A2O94788 518 aa18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 RHOBTB1O94844 696 aa18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 IGLV3-25P01717 112 aa18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 ELF2Q15723 593 aa18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 FAM133BQ5BKY9 247 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 GBP6Q6ZN66 633 aa18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 NUDT18Q6ZVK8 323 aa18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 TMEM110Q86TL2 294 aa18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 WDTC1Q8N5D0 677 aa18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 IPO4Q8TEX9 1081 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 RLN3Q8WXF3 142 aa18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 SLC39A13Q96H72 371 aa18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 SMOC1Q9H4F8 434 aa18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 THAP10Q9P2Z0 257 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 CDV3Q9UKY7 258 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 KMT2BQ9UMN6 2715 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC3-202ENST00000373162 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 NDUFV2P19404 249 aa18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 WASP42768 502 aa18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 SGSHP51688 502 aa18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 NNTQ13423 1086 aa18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 MAN2A1Q16706 1144 aa18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 EXOC3L4Q17RC7 722 aa18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 PEAR1Q5VY43 1037 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 NADSYN1Q6IA69 706 aa18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 DQX1Q8TE96 717 aaKnown RBP18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 RNF139Q8WU17 664 aa18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 HMGB4Q8WW32 186 aa18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 AZIN2Q96A70 460 aa18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 LMLNQ96KR4 655 aa18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 FCRL2Q96LA5 508 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 FAM81BQ96LP2 452 aa18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 IRX2Q9BZI1 471 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 NUP62CLQ9H1M0 184 aa18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 VPS45Q9NRW7 570 aa18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 CACNA2D2Q9NY47 1150 aa18.75■□□□□ 0.59
TRAPPC3-202ENST00000373162 CALCOCO1Q9P1Z2 691 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms