RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 KRTAP19-4Q3LI73 84 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 TTC39AQ5SRH9 613 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 YOD1Q5VVQ6 348 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 DCAF15Q66K64 600 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 IYDQ6PHW0 289 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 INTS8Q75QN2 995 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 CCDC80Q76M96 950 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 TMPRSS7Q7RTY8 843 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 SPATA2LQ8IUW3 424 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 HERC6Q8IVU3 1022 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 TMEM151BQ8IW70 566 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 CCDC105Q8IYK2 499 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 ZBTB44Q8NCP5 570 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 SIMC1Q8NDZ2 872 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PLBD2Q8NHP8 589 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 SYTL5Q8TDW5 730 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 FAM216AQ8WUB2 273 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 DIO2Q92813 273 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PHKBQ93100 1093 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 C1GALT1C1Q96EU7 318 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 EPSTI1Q96J88 318 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 MAELQ96JY0 434 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 C17orf80Q9BSJ5 609 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 COA1Q9GZY4 146 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 ERVMER34-1Q9H9K5 563 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 LIN28AQ9H9Z2 209 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 GP6Q9HCN6 339 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PDE7BQ9NP56 450 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 CHST7Q9NS84 486 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 SEMA3GQ9NS98 782 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 PPP1R14DQ9NXH3 145 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 LMCD1Q9NZU5 365 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 WHRNQ9P202 907 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 GRHPRQ9UBQ7 328 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 SLC5A6Q9Y289 635 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 FHOD1Q9Y613 1164 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 TICRRQ7Z2Z1 1910 aa3.74□□□□□ -1.81
ECHDC1-205ENST00000368295 CTAGE9A4FU28 777 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 SLC30A4O14863 429 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 SEPT4O43236 478 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 NMT2O60551 498 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 FMO6PO60774 539 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 TRIM16O95361 564 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 SLU7O95391 586 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 MYBP10242 640 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 NR2F1P10589 423 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 CYP2A6P11509 494 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 SRFP11831 508 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 PABPC1P11940 636 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 PORP16435 677 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 GNAT2P19087 354 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 SDHBP21912 280 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 IL10P22301 178 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 PDIA3P30101 505 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 POLD2P49005 469 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 CENPAP49450 140 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 RIPPLY3P57055 190 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 CTAG1AP78358 180 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 IFI35P80217 286 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 TRDNQ13061 729 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 SLC14A1Q13336 389 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 SMAD4Q13485 552 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 LAPTM5Q13571 262 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 KRT71Q3SY84 523 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 ZACNQ401N2 412 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 LILRA6Q6PI73 481 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 PACS1Q6VY07 963 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 NSMFQ6X4W1 530 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 TMC3Q7Z5M5 1100 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 FGD2Q7Z6J4 655 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 PLEKHH3Q7Z736 793 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 TSPYL5Q86VY4 417 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 DENND1CQ8IV53 801 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 MAML2Q8IZL2 1156 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 ANKRD53Q8N9V6 530 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 DAGLBQ8NCG7 672 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 KREMEN2Q8NCW0 462 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 AGBL5Q8NDL9 886 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 TNIP2Q8NFZ5 429 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 ETNPPLQ8TBG4 499 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 NOC3LQ8WTT2 800 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 TEKT4Q8WW24 435 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 HTRA1Q92743 480 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 FATE1Q969F0 183 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 UBE2FQ969M7 185 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 RRP36Q96EU6 259 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 EDC3Q96F86 508 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 MAGEB10Q96LZ2 347 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 TEKT5Q96M29 485 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 RUNDC3BQ96NL0 473 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 TOX2Q96NM4 488 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 FNBP1Q96RU3 617 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 MAP7D2Q96T17 732 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 PYM1Q9BRP8 204 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 ZPBPQ9BS86 351 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 DSCC1Q9BVC3 393 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 HERC2P3Q9BVR0 1158 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 HDAC8Q9BY41 377 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 KLHL25Q9H0H3 589 aa3.73□□□□□ -1.81
ECHDC1-205ENST00000368295 DUSP15Q9H1R2 295 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms