RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 CCNG2Q16589 344 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 DNAJC21Q5F1R6 531 aaKnown RBP12.54□□□□□ -0.4
USF1-203ENST00000368021 BSPRYQ5W0U4 402 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 DRICH1Q6PGQ1 229 aaPredicted RBP12.54□□□□□ -0.4
USF1-203ENST00000368021 CCDC137Q6PK04 289 aaKnown RBP12.54□□□□□ -0.4
USF1-203ENST00000368021 RNF19BQ6ZMZ0 732 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 PACS2Q86VP3 889 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 IFT20Q8IY31 132 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 ACSF2Q96CM8 615 aaPredicted RBP12.54□□□□□ -0.4
USF1-203ENST00000368021 SNRNP25Q9BV90 132 aaKnown RBP12.54□□□□□ -0.4
USF1-203ENST00000368021 GDF3Q9NR23 364 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 ABCC13Q9NSE7 274 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 COMMD8Q9NX08 183 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 SCML2Q9UQR0 700 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 PLXNA3P51805 1871 aa12.54□□□□□ -0.4
USF1-203ENST00000368021 KIAA1671Q9BY89 1806 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 WDR27A2RRH5 827 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 M0QYT0 321 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 RTN3O95197 1032 aaPredicted RBP12.53□□□□□ -0.4
USF1-203ENST00000368021 KRT10P13645 584 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 OR1D2P34982 312 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 CA8P35219 290 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 ARPP19P56211 112 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 ERVFC1P60507 584 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 RPL10AP62906 217 aaKnown RBP12.53□□□□□ -0.4
USF1-203ENST00000368021 KRT17Q04695 432 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 DPYSL3Q14195 570 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 LLGL1Q15334 1064 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 DDR2Q16832 855 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 TPGS2Q68CL5 300 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 DENND5BQ6ZUT9 1274 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 BBS12Q6ZW61 710 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 MON1AQ86VX9 555 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 EIF1ADQ8N9N8 165 aaKnown RBP12.53□□□□□ -0.4
USF1-203ENST00000368021 SEC14L1Q92503 715 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 MRPL38Q96DV4 380 aaKnown RBP12.53□□□□□ -0.4
USF1-203ENST00000368021 ZNF670Q9BS34 389 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 FRMD8P1Q9BZ68 369 aaPredicted RBP12.53□□□□□ -0.4
USF1-203ENST00000368021 DCLK3Q9C098 648 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 TTI1O43156 1089 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 ABLIM3O94929 683 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 URODP06132 367 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 CD48P09326 243 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 ATXN1P54253 815 aaKnown RBP12.53□□□□□ -0.4
USF1-203ENST00000368021 YWHAGP61981 247 aaKnown RBP eCLIP12.53□□□□□ -0.4
USF1-203ENST00000368021 DEUP1Q05D60 604 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 ADCY2Q08462 1091 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 MGAT5BQ3V5L5 792 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 KAZNQ674X7 775 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 TTC27Q6P3X3 843 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 CCNI2Q6ZMN8 369 aaPredicted RBP12.53□□□□□ -0.4
USF1-203ENST00000368021 RBM23Q86U06 439 aaKnown RBP12.53□□□□□ -0.4
USF1-203ENST00000368021 CCDC105Q8IYK2 499 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 ARHGAP18Q8N392 663 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 OTUD6BQ8N6M0 293 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 TTC9BQ8N6N2 239 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 TTC13Q8NBP0 860 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 ZNF461Q8TAF7 563 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 SLC7A14Q8TBB6 771 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 NTAN1Q96AB6 310 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 FAF2Q96CS3 445 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 CLSTN3Q9BQT9 956 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 CALN1Q9BXU9 219 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 RAB17Q9H0T7 212 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 CRISPLD1Q9H336 500 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 AFF4Q9UHB7 1163 aaKnown RBP12.53□□□□□ -0.4
USF1-203ENST00000368021 RASAL2Q9UJF2 1139 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 ADAM21Q9UKJ8 722 aa12.53□□□□□ -0.4
USF1-203ENST00000368021 UTP11Q9Y3A2 253 aaKnown RBP12.53□□□□□ -0.4
USF1-203ENST00000368021 GREB1Q4ZG55 1949 aa12.52□□□□□ -0.4
USF1-203ENST00000368021 ZNF638Q14966 1978 aaKnown RBP12.52□□□□□ -0.41
USF1-203ENST00000368021 ADAM12O43184 909 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 IGLV3-25P01717 112 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 PTGIRP43119 386 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 TUFMP49411 452 aaKnown RBP12.52□□□□□ -0.41
USF1-203ENST00000368021 PITX1P78337 314 aaPredicted RBP12.52□□□□□ -0.41
USF1-203ENST00000368021 MRPS25P82663 173 aaKnown RBP12.52□□□□□ -0.41
USF1-203ENST00000368021 GUCY2DQ02846 1103 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 CREMQ03060 361 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 SCAPQ12770 1279 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 DUSP4Q13115 394 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 TFDP2Q14188 446 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 KRT81Q14533 505 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 MAP9Q49MG5 647 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 ZC3H12AQ5D1E8 599 aaKnown RBP12.52□□□□□ -0.41
USF1-203ENST00000368021 BTBD8Q5XKL5 378 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 EP400NLQ6ZTU2 488 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 TMC7Q7Z402 723 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 FAM131BQ86XD5 332 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 JAMLQ86YT9 394 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 VPS52Q8N1B4 723 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 ATL2Q8NHH9 583 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 GRK7Q8WTQ7 553 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 C1orf54Q8WWF1 131 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 AUTS2Q8WXX7 1259 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.52□□□□□ -0.41
USF1-203ENST00000368021 TCF25Q9BQ70 676 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 IGFLR1Q9H665 355 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 PCDH18Q9HCL0 1135 aa12.52□□□□□ -0.41
USF1-203ENST00000368021 EPB41L5Q9HCM4 733 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 1213.1 ms