RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 GRIK3Q13003 919 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 MAD2L1Q13257 205 aaPredicted RBP5□□□□□ -1.61
SCN3A-202ENST00000360093 STARD3Q14849 445 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 DUSP28Q4G0W2 176 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 ZBTB41Q5SVQ8 909 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 PPP1R15BQ5SWA1 713 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 ZNF467Q7Z7K2 595 aaPredicted RBP5□□□□□ -1.61
SCN3A-202ENST00000360093 TTC30BQ8N4P2 665 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 SLC2A14Q8TDB8 520 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 TADA1Q96BN2 335 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 DNAJC19Q96DA6 116 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 CPNE1Q99829 537 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 EPC1Q9H2F5 836 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 SCHIP1Q9P0W5 487 aaPredicted RBP5□□□□□ -1.61
SCN3A-202ENST00000360093 RUVBL2Q9Y230 463 aaKnown RBP5□□□□□ -1.61
SCN3A-202ENST00000360093 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5□□□□□ -1.61
SCN3A-202ENST00000360093 IFRD1O00458 451 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 GLI1P08151 1106 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 PGAM1P18669 254 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 SERPINB10P48595 397 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 HSPA13P48723 471 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ST3GAL1Q11201 340 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CNTN1Q12860 1018 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 PDPK2PQ6A1A2 396 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 MAGEC3Q8TD91 643 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 INPP4AQ96PE3 977 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 KLC4Q9NSK0 619 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 PTCH2Q9Y6C5 1203 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CLUHO75153 1309 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CCDC78A2IDD5 438 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ZSCAN5CA6NGD5 496 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 TMEM88BA6NKF7 163 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CCT8L1PA6NM43 557 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 DNALI1O14645 258 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ARIH2O95376 493 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 GNRH1P01148 92 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 SERPIND1P05546 499 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 TUBP50607 506 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 PRPF39Q86UA1 669 aaKnown RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 LCA5Q86VQ0 697 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ARHGEF19Q8IW93 802 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 TOP6BLQ8N6T0 577 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ARMC2Q8NEN0 867 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 AGR3Q8TD06 166 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 WNT8BQ93098 351 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 IL22Q9GZX6 179 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 VTI1BQ9UEU0 232 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 DNMT3LQ9UJW3 386 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 DYRK1BQ9Y463 629 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 MYH2Q9UKX2 1941 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 O00370 1275 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ZNF862O60290 1169 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 TBC1D4O60343 1298 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 BMP10O95393 424 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 TSHRP16473 764 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CYP2A7P20853 494 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 COPAP53621 1224 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 PDE1CQ14123 709 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 NOMO2Q5JPE7 1267 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 SYCP2LQ5T4T6 812 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ZNF438Q7Z4V0 828 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 POLNQ7Z5Q5 900 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 PHACTR1Q9C0D0 580 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 POLR1EQ9GZS1 481 aaKnown RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CDC42EP4Q9H3Q1 356 aaKnown RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 TMBIM4Q9HC24 238 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 NT5MQ9NPB1 228 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 AHSPQ9NZD4 102 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CDV3Q9UKY7 258 aaKnown RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 AURKCQ9UQB9 309 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 SIK3Q9Y2K2 1263 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 DUSP10Q9Y6W6 482 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CHKAP35790 457 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 PIK3CGP48736 1102 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ZNF143P52747 638 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 SEL1L3Q68CR1 1132 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ANKRD52Q8NB46 1076 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 RIN3Q8TB24 985 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 GFM2Q969S9 779 aaKnown RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 PPP1R16AQ96I34 528 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 MFSD14AQ96MC6 490 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 C2orf49Q9BVC5 232 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 APOL5Q9BWW9 433 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CCDC134Q9H6E4 229 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 EFCAB1Q9HAE3 211 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 NMRK2Q9NPI5 230 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CBX4O00257 560 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 VPS4BO75351 444 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 FARP2O94887 1054 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CSH1P0DML2 217 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CSH2P0DML3 217 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ENO3P13929 434 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CCND1P24385 295 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 PTPN7P35236 360 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 GP5P40197 560 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ZBTB17Q13105 803 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 ORC1Q13415 861 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CBWD6Q4V339 395 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CBWD3Q5JTY5 395 aa4.99□□□□□ -1.61
SCN3A-202ENST00000360093 CBWD5Q5RIA9 395 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms