RNA–Protein interactions for RNA: ENST00000346691.9

ATRIP-202, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-202ENST00000346691 ARHGEF4Q9NR80 690 aa19.25■□□□□ 0.67
ATRIP-202ENST00000346691 PAK5Q9P286 719 aa19.25■□□□□ 0.67
ATRIP-202ENST00000346691 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.24■□□□□ 0.67
ATRIP-202ENST00000346691 C5orf60A6NFR6 353 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 DNM1LO00429 736 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 ALDH1A1P00352 501 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 BDNFP23560 247 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 DEUP1Q05D60 604 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 PREPLQ4J6C6 727 aaPredicted RBP19.24■□□□□ 0.67
ATRIP-202ENST00000346691 BHLHA9Q7RTU4 235 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 RTN4RL1Q86UN2 441 aaPredicted RBP19.24■□□□□ 0.67
ATRIP-202ENST00000346691 TRABD2AQ86V40 505 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 VSIG1Q86XK7 387 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 C4orf33Q8N1A6 199 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 OR10T2Q8NGX3 314 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 TRIM56Q9BRZ2 755 aaKnown RBP19.24■□□□□ 0.67
ATRIP-202ENST00000346691 CEP41Q9BYV8 373 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 CDH9Q9ULB4 789 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 APRTP07741 180 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 RPL9P32969 192 aaKnown RBP19.24■□□□□ 0.67
ATRIP-202ENST00000346691 PTK7Q13308 1070 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 MBTPS1Q14703 1052 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 SLC45A4Q5BKX6 768 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 PALM2Q8IXS6 379 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 ATP11CQ8NB49 1132 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 RNF139Q8WU17 664 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 DYDC1Q8WWB3 177 aa19.24■□□□□ 0.67
ATRIP-202ENST00000346691 KBTBD13C9JR72 458 aa19.23■□□□□ 0.67
ATRIP-202ENST00000346691 TRPA1O75762 1119 aa19.23■□□□□ 0.67
ATRIP-202ENST00000346691 VIMP08670 466 aaKnown RBP19.23■□□□□ 0.67
ATRIP-202ENST00000346691 SPRED3Q2MJR0 410 aa19.23■□□□□ 0.67
ATRIP-202ENST00000346691 EFHC2Q5JST6 749 aa19.23■□□□□ 0.67
ATRIP-202ENST00000346691 GPBP1L1Q9HC44 474 aaPredicted RBP19.23■□□□□ 0.67
ATRIP-202ENST00000346691 SNX10Q9Y5X0 201 aa19.23■□□□□ 0.67
ATRIP-202ENST00000346691 NDC80O14777 642 aa19.23■□□□□ 0.67
ATRIP-202ENST00000346691 CAPN9O14815 690 aa19.23■□□□□ 0.67
ATRIP-202ENST00000346691 CHADO15335 359 aa19.23■□□□□ 0.67
ATRIP-202ENST00000346691 FAM163BP0C2L3 166 aa19.23■□□□□ 0.67
ATRIP-202ENST00000346691 ODC1P11926 461 aa19.23■□□□□ 0.67
ATRIP-202ENST00000346691 NCAM1P13591 858 aa19.23■□□□□ 0.67
ATRIP-202ENST00000346691 RAB41Q5JT25 222 aa19.23■□□□□ 0.67
ATRIP-202ENST00000346691 CAND1Q86VP6 1230 aaKnown RBP19.23■□□□□ 0.67
ATRIP-202ENST00000346691 ECHDC2Q86YB7 292 aa19.23■□□□□ 0.67
ATRIP-202ENST00000346691 PCSK9Q8NBP7 692 aaKnown RBP19.23■□□□□ 0.67
ATRIP-202ENST00000346691 QKIQ96PU8 341 aaKnown RBP eCLIP19.23■□□□□ 0.67
ATRIP-202ENST00000346691 SRRDQ9UH36 339 aa19.23■□□□□ 0.67
ATRIP-202ENST00000346691 TEX264Q9Y6I9 313 aa19.23■□□□□ 0.67
ATRIP-202ENST00000346691 ZNF487B1APH4 448 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 KRT15P19012 456 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 ARL4AP40617 200 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 GRIA1P42261 906 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 RAB27AP51159 221 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 TDRPQ86YL5 185 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 CDKL3Q8IVW4 592 aaPredicted RBP19.22■□□□□ 0.67
ATRIP-202ENST00000346691 CACNA2D3Q8IZS8 1091 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 CFAP36Q96G28 342 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 HHIPL1Q96JK4 782 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 WDR6Q9NNW5 1121 aaKnown RBP19.22■□□□□ 0.67
ATRIP-202ENST00000346691 CKBP12277 381 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 GEMIN4P57678 1058 aaKnown RBP19.22■□□□□ 0.67
ATRIP-202ENST00000346691 NOGQ13253 232 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 MAP3K21Q5TCX8 1036 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 CYB5D1Q6P9G0 228 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 ZNF598Q86UK7 904 aaKnown RBP19.22■□□□□ 0.67
ATRIP-202ENST00000346691 ZNF280BQ86YH2 543 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 PARP9Q8IXQ6 854 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 SMC1BQ8NDV3 1235 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 LINC01599Q8WXQ3 324 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 CAPNS2Q96L46 248 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 PAFAH2Q99487 392 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 TRABDQ9H4I3 376 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 CCDC134Q9H6E4 229 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 MCM8Q9UJA3 840 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 STAP1Q9ULZ2 295 aa19.22■□□□□ 0.67
ATRIP-202ENST00000346691 CFAP69A5D8W1 941 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 TCP11X1B4DZS4 312 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 YWHAGP61981 247 aaKnown RBP eCLIP19.21■□□□□ 0.67
ATRIP-202ENST00000346691 GRIK3Q13003 919 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 TUSC3Q13454 348 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 WLSQ5T9L3 541 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 TRAF7Q6Q0C0 670 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 RNF180Q86T96 592 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 PRPF39Q86UA1 669 aaKnown RBP19.21■□□□□ 0.67
ATRIP-202ENST00000346691 RIBC1Q8N443 379 aaPredicted RBP19.21■□□□□ 0.67
ATRIP-202ENST00000346691 GIMAP7Q8NHV1 300 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 RSPH1Q8WYR4 309 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 SMARCD1Q96GM5 515 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 OLFM3Q96PB7 478 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 ACSS3Q9H6R3 686 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 PLAC1Q9HBJ0 212 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 FRMPD3Q5JV73 1810 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 DGKIO75912 1065 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 LTFP02788 710 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 OR4Q2P0C623 313 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 PCSK1P29120 753 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 WDR4P57081 412 aaKnown RBP19.21■□□□□ 0.67
ATRIP-202ENST00000346691 SNCBQ16143 134 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 INTS6LQ5JSJ4 861 aaKnown RBP19.21■□□□□ 0.67
ATRIP-202ENST00000346691 FAM26DQ5JW98 314 aa19.21■□□□□ 0.67
ATRIP-202ENST00000346691 DENND5BQ6ZUT9 1274 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms