RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 GSTCDQ8NEC7 633 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 FAM89AQ96GI7 184 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 ARL5BQ96KC2 179 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 MMRN2Q9H8L6 949 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 CHST12Q9NRB3 414 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 GJB4Q9NTQ9 266 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 PKD2L1Q9P0L9 805 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 AMOTL2Q9Y2J4 779 aa8.87□□□□□ -0.99
TDP1-201ENST00000335725 ESYT2A0FGR8 921 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 SH3D21A4FU49 640 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 GCATO75600 419 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 RFPL2O75678 378 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 FGGP02679 453 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 GSNP06396 782 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 ACTN1P12814 892 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 GYS1P13807 737 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 MTHFRP42898 656 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 ZNF124Q15973 351 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 RBM20Q5T481 1227 aaKnown RBP8.86□□□□□ -0.99
TDP1-201ENST00000335725 HGSNATQ68CP4 663 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 SDE2Q6IQ49 451 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 ARHGAP36Q6ZRI8 547 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 TMEM80Q96HE8 168 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 OXNAD1Q96HP4 312 aaPredicted RBP8.86□□□□□ -0.99
TDP1-201ENST00000335725 CNDP2Q96KP4 475 aaKnown RBP8.86□□□□□ -0.99
TDP1-201ENST00000335725 WRNIP1Q96S55 665 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 TEX13BQ9BXU2 312 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 SLC2A11Q9BYW1 496 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.86□□□□□ -0.99
TDP1-201ENST00000335725 SFTPCP11686 197 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 KLK7P49862 253 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 ERFP50548 548 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 KCNQ4P56696 695 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 TOP3AQ13472 1001 aaPredicted RBP8.86□□□□□ -0.99
TDP1-201ENST00000335725 PON2Q15165 354 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 TLK2Q86UE8 772 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 NUDCD3Q8IVD9 361 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 BBS7Q8IWZ6 715 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 TTC5Q8N0Z6 440 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 MAGEB6Q8N7X4 407 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 APOPT1Q96IL0 206 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 ZNF578Q96N58 590 aaPredicted RBP8.86□□□□□ -0.99
TDP1-201ENST00000335725 TWNKQ96RR1 684 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 BOLA2Q9H3K6 86 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 CDC42EP4Q9H3Q1 356 aaKnown RBP8.86□□□□□ -0.99
TDP1-201ENST00000335725 SP110Q9HB58 689 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 GRHL1Q9NZI5 618 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 PKD2L2Q9NZM6 624 aa8.86□□□□□ -0.99
TDP1-201ENST00000335725 CNOT11Q9UKZ1 510 aaKnown RBP8.86□□□□□ -0.99
TDP1-201ENST00000335725 ACSL3O95573 720 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 ENO1P06733 434 aaKnown RBP8.85□□□□□ -0.99
TDP1-201ENST00000335725 ITGALP20701 1170 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 HTR7P34969 479 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 SOX5P35711 763 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 MAGEA4P43358 317 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 CACNB3P54284 484 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 GARNL3Q5VVW2 1013 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 ZFP1Q6P2D0 407 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 LYSMD3Q7Z3D4 306 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 SLFN11Q7Z7L1 901 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 USP37Q86T82 979 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 DENND1AQ8TEH3 1009 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 SPOCK2Q92563 424 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 MCRS1Q96EZ8 462 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 ZFYVE19Q96K21 471 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 CNOT6LQ96LI5 555 aaKnown RBP8.85□□□□□ -0.99
TDP1-201ENST00000335725 BEGAINQ9BUH8 593 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 DCLK3Q9C098 648 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 SLC6A17Q9H1V8 727 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 RAVER2Q9HCJ3 691 aaKnown RBP8.85□□□□□ -0.99
TDP1-201ENST00000335725 INTS7Q9NVH2 962 aaKnown RBP8.85□□□□□ -0.99
TDP1-201ENST00000335725 NAALADL1Q9UQQ1 740 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 VWA7Q9Y334 891 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 CEP170BQ9Y4F5 1589 aaPredicted RBP8.85□□□□□ -0.99
TDP1-201ENST00000335725 SLITRK5O94991 958 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 SNAP29O95721 258 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 NPR3P17342 541 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 ATF7P17544 494 aaPredicted RBP8.85□□□□□ -0.99
TDP1-201ENST00000335725 GARTP22102 1010 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 NDST2P52849 883 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 TXNL4AP83876 142 aaKnown RBP8.85□□□□□ -0.99
TDP1-201ENST00000335725 BNC1Q01954 994 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 CENPCQ03188 943 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 DLG2Q15700 870 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 INAVAQ3KP66 663 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 POTEAQ6S8J7 498 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 ARSKQ6UWY0 536 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 ISLR2Q6UXK2 745 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 RANBP10Q6VN20 620 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 BEND4Q6ZU67 534 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 GALNT12Q8IXK2 581 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 MB21D2Q8IYB1 491 aaPredicted RBP8.85□□□□□ -0.99
TDP1-201ENST00000335725 BEND7Q8N7W2 519 aaPredicted RBP8.85□□□□□ -0.99
TDP1-201ENST00000335725 HDAC11Q96DB2 347 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 SLC47A1Q96FL8 570 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 TRIM56Q9BRZ2 755 aaKnown RBP8.85□□□□□ -0.99
TDP1-201ENST00000335725 TMEM120AQ9BXJ8 343 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 GHITMQ9H3K2 345 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 MCM9Q9NXL9 1143 aa8.85□□□□□ -0.99
TDP1-201ENST00000335725 GPRC5BQ9NZH0 403 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms