RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 MFAP3P55082 362 aa18.55■□□□□ 0.56
HDDC3-201ENST00000330334 STX17P56962 302 aa18.55■□□□□ 0.56
HDDC3-201ENST00000330334 STPG1Q5TH74 334 aa18.55■□□□□ 0.56
HDDC3-201ENST00000330334 IL31Q6EBC2 164 aa18.55■□□□□ 0.56
HDDC3-201ENST00000330334 PMF1Q6P1K2 205 aa18.55■□□□□ 0.56
HDDC3-201ENST00000330334 RRAGAQ7L523 313 aa18.55■□□□□ 0.56
HDDC3-201ENST00000330334 FMNL3Q8IVF7 1028 aa18.55■□□□□ 0.56
HDDC3-201ENST00000330334 RBBP8NLQ8NC74 664 aaPredicted RBP18.55■□□□□ 0.56
HDDC3-201ENST00000330334 RLN3Q8WXF3 142 aa18.55■□□□□ 0.56
HDDC3-201ENST00000330334 NDRG1Q92597 394 aaKnown RBP18.55■□□□□ 0.56
HDDC3-201ENST00000330334 IRX2Q9BZI1 471 aaPredicted RBP18.55■□□□□ 0.56
HDDC3-201ENST00000330334 PLK2Q9NYY3 685 aa18.55■□□□□ 0.56
HDDC3-201ENST00000330334 MBD1Q9UIS9 605 aaPredicted RBP18.55■□□□□ 0.56
HDDC3-201ENST00000330334 CNOT1A5YKK6 2376 aaKnown RBP18.54■□□□□ 0.56
HDDC3-201ENST00000330334 MAP3K13O43283 966 aa18.54■□□□□ 0.56
HDDC3-201ENST00000330334 TIMM44O43615 452 aa18.54■□□□□ 0.56
HDDC3-201ENST00000330334 ZNF217O75362 1048 aa18.54■□□□□ 0.56
HDDC3-201ENST00000330334 GABBR2O75899 941 aa18.54■□□□□ 0.56
HDDC3-201ENST00000330334 FBXO21O94952 628 aa18.54■□□□□ 0.56
HDDC3-201ENST00000330334 RPL34P49207 117 aaKnown RBP18.54■□□□□ 0.56
HDDC3-201ENST00000330334 ENPP2Q13822 863 aa18.54■□□□□ 0.56
HDDC3-201ENST00000330334 MEA1Q16626 185 aa18.54■□□□□ 0.56
HDDC3-201ENST00000330334 MSANTD2Q6P1R3 559 aa18.54■□□□□ 0.56
HDDC3-201ENST00000330334 ENOSF1Q7L5Y1 443 aa18.54■□□□□ 0.56
HDDC3-201ENST00000330334 ARHGEF19Q8IW93 802 aa18.54■□□□□ 0.56
HDDC3-201ENST00000330334 PGBD3Q8N328 593 aa18.54■□□□□ 0.56
HDDC3-201ENST00000330334 IPO4Q8TEX9 1081 aaKnown RBP18.54■□□□□ 0.56
HDDC3-201ENST00000330334 BHMTQ93088 406 aa18.54■□□□□ 0.56
HDDC3-201ENST00000330334 PIWIL1Q96J94 861 aaKnown RBP18.54■□□□□ 0.56
HDDC3-201ENST00000330334 FAM81BQ96LP2 452 aa18.54■□□□□ 0.56
HDDC3-201ENST00000330334 KREMEN1Q96MU8 473 aa18.54■□□□□ 0.56
HDDC3-201ENST00000330334 ACOX2Q99424 681 aa18.54■□□□□ 0.56
HDDC3-201ENST00000330334 CHMP5Q9NZZ3 219 aa18.54■□□□□ 0.56
HDDC3-201ENST00000330334 KHNYNO15037 678 aaKnown RBP18.53■□□□□ 0.56
HDDC3-201ENST00000330334 LCP1P13796 627 aa18.53■□□□□ 0.56
HDDC3-201ENST00000330334 HOXD12P35452 270 aa18.53■□□□□ 0.56
HDDC3-201ENST00000330334 EIF4HQ15056 248 aaKnown RBP18.53■□□□□ 0.56
HDDC3-201ENST00000330334 MPPE1Q53F39 396 aa18.53■□□□□ 0.56
HDDC3-201ENST00000330334 ADGRF1Q5T601 910 aa18.53■□□□□ 0.56
HDDC3-201ENST00000330334 SLC36A4Q6YBV0 504 aa18.53■□□□□ 0.56
HDDC3-201ENST00000330334 CYP2U1Q7Z449 544 aa18.53■□□□□ 0.56
HDDC3-201ENST00000330334 STK32AQ8WU08 396 aa18.53■□□□□ 0.56
HDDC3-201ENST00000330334 UCMAQ8WVF2 138 aa18.53■□□□□ 0.56
HDDC3-201ENST00000330334 EDEM1Q92611 657 aa18.53■□□□□ 0.56
HDDC3-201ENST00000330334 INTS2Q9H0H0 1204 aaKnown RBP18.53■□□□□ 0.56
HDDC3-201ENST00000330334 SMOC1Q9H4F8 434 aa18.53■□□□□ 0.56
HDDC3-201ENST00000330334 THAP10Q9P2Z0 257 aaPredicted RBP18.53■□□□□ 0.56
HDDC3-201ENST00000330334 EVLQ9UI08 416 aaPredicted RBP18.53■□□□□ 0.56
HDDC3-201ENST00000330334 M0QYV0 167 aa18.52■□□□□ 0.56
HDDC3-201ENST00000330334 BRD2P25440 801 aaKnown RBP18.52■□□□□ 0.56
HDDC3-201ENST00000330334 DHPSP49366 369 aaPredicted RBP18.52■□□□□ 0.56
HDDC3-201ENST00000330334 RING1Q06587 406 aa18.52■□□□□ 0.56
HDDC3-201ENST00000330334 PPM1JQ5JR12 505 aa18.52■□□□□ 0.56
HDDC3-201ENST00000330334 RNF43Q68DV7 783 aa18.52■□□□□ 0.56
HDDC3-201ENST00000330334 BEND5Q7L4P6 421 aa18.52■□□□□ 0.56
HDDC3-201ENST00000330334 ANKS1BQ7Z6G8 1248 aa18.52■□□□□ 0.56
HDDC3-201ENST00000330334 METTL3Q86U44 580 aaKnown RBP18.52■□□□□ 0.56
HDDC3-201ENST00000330334 SYT12Q8IV01 421 aa18.52■□□□□ 0.56
HDDC3-201ENST00000330334 MLKLQ8NB16 471 aa18.52■□□□□ 0.56
HDDC3-201ENST00000330334 DDI1Q8WTU0 396 aa18.52■□□□□ 0.56
HDDC3-201ENST00000330334 AZIN2Q96A70 460 aa18.52■□□□□ 0.56
HDDC3-201ENST00000330334 LSM14BQ9BX40 385 aaKnown RBP18.52■□□□□ 0.56
HDDC3-201ENST00000330334 CALCOCO1Q9P1Z2 691 aa18.52■□□□□ 0.56
HDDC3-201ENST00000330334 SFMBT1Q9UHJ3 866 aa18.52■□□□□ 0.56
HDDC3-201ENST00000330334 LNP1A1A4G5 178 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 SART1O43290 800 aaKnown RBP18.51■□□□□ 0.55
HDDC3-201ENST00000330334 AP5Z1O43299 807 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 IGLV3-27P01718 113 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 ADRB1P08588 477 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 WASP42768 502 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 GPD2P43304 727 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 RGS7P49802 495 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 CAMK4Q16566 473 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 GEN1Q17RS7 908 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 MPP7Q5T2T1 576 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 TCEAL6Q6IPX3 200 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 KIAA1211LQ6NV74 962 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 UNC45BQ8IWX7 931 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 FRMD1Q8N878 549 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 GOLGA1Q92805 767 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 TCEAL3Q969E4 200 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 MRGPRX1Q96LB2 322 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 MED15Q96RN5 788 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 UBE2TQ9NPD8 197 aaPredicted RBP18.51■□□□□ 0.55
HDDC3-201ENST00000330334 ELOVL2Q9NXB9 296 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 CACNA2D2Q9NY47 1150 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 STON1Q9Y6Q2 735 aa18.51■□□□□ 0.55
HDDC3-201ENST00000330334 THADAQ6YHU6 1953 aa18.5■□□□□ 0.55
HDDC3-201ENST00000330334 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.5■□□□□ 0.55
HDDC3-201ENST00000330334 GTPBP10A4D1E9 387 aaKnown RBP18.5■□□□□ 0.55
HDDC3-201ENST00000330334 MED7O43513 233 aa18.5■□□□□ 0.55
HDDC3-201ENST00000330334 LTFP02788 710 aa18.5■□□□□ 0.55
HDDC3-201ENST00000330334 NDUFV2P19404 249 aa18.5■□□□□ 0.55
HDDC3-201ENST00000330334 HOXD9P28356 352 aaPredicted RBP18.5■□□□□ 0.55
HDDC3-201ENST00000330334 PTGER3P43115 390 aa18.5■□□□□ 0.55
HDDC3-201ENST00000330334 ACADSBP45954 432 aa18.5■□□□□ 0.55
HDDC3-201ENST00000330334 PEAR1Q5VY43 1037 aaPredicted RBP18.5■□□□□ 0.55
HDDC3-201ENST00000330334 LYSMD4Q5XG99 296 aa18.5■□□□□ 0.55
HDDC3-201ENST00000330334 NUGGCQ68CJ6 796 aa18.5■□□□□ 0.55
HDDC3-201ENST00000330334 TMEFF1Q8IYR6 380 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms