RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 ETNK2Q9NVF9 386 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 RABGEF1Q9UJ41 708 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 TCRBV9S1A1TA0A576 114 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 CLOCKO15516 846 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 HBP1O60381 514 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 TCEA3O75764 348 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 ASMTLO95671 621 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 CALCAP01258 141 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 COX4I1P13073 169 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 FOLH1Q04609 750 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 ZNF235Q14590 738 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 SPANXN3Q5MJ09 141 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 EFCAB12Q6NXP0 572 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 SCN4BQ8IWT1 228 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 TSPAN14Q8NG11 270 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 HTR3CQ8WXA8 447 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 USP6NLQ92738 828 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 CASP10Q92851 521 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 CHST12Q9NRB3 414 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 COPG2Q9UBF2 871 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 VANGL2Q9ULK5 521 aa19.83■□□□□ 0.77
USP48-201ENST00000308271 TMEM150BA6NC51 233 aa19.83■□□□□ 0.76
USP48-201ENST00000308271 C6orf222P0C671 652 aaPredicted RBP19.83■□□□□ 0.76
USP48-201ENST00000308271 ERO1BQ86YB8 467 aa19.83■□□□□ 0.76
USP48-201ENST00000308271 ZNF280CQ8ND82 737 aa19.83■□□□□ 0.76
USP48-201ENST00000308271 PXMP2Q9NR77 195 aa19.83■□□□□ 0.76
USP48-201ENST00000308271 ITGB1BP2Q9UKP3 347 aa19.83■□□□□ 0.76
USP48-201ENST00000308271 AAR2Q9Y312 384 aaKnown RBP19.83■□□□□ 0.76
USP48-201ENST00000308271 IREB2P48200 963 aaKnown RBP19.83■□□□□ 0.76
USP48-201ENST00000308271 CHRNB3Q05901 458 aa19.83■□□□□ 0.76
USP48-201ENST00000308271 PTP4A2Q12974 167 aa19.83■□□□□ 0.76
USP48-201ENST00000308271 SAMD4BQ5PRF9 694 aaKnown RBP19.83■□□□□ 0.76
USP48-201ENST00000308271 RBBP8Q99708 897 aa19.83■□□□□ 0.76
USP48-201ENST00000308271 KLHL25Q9H0H3 589 aa19.83■□□□□ 0.76
USP48-201ENST00000308271 WDR41Q9HAD4 459 aa19.83■□□□□ 0.76
USP48-201ENST00000308271 DPP3Q9NY33 737 aa19.83■□□□□ 0.76
USP48-201ENST00000308271 AK5Q9Y6K8 562 aa19.83■□□□□ 0.76
USP48-201ENST00000308271 COL5A2P05997 1499 aaPredicted RBP19.82■□□□□ 0.76
USP48-201ENST00000308271 M0QYT0 321 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 PIAS1O75925 651 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 RAP1GAPP47736 663 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 RBM15BQ8NDT2 890 aaKnown RBP19.82■□□□□ 0.76
USP48-201ENST00000308271 GSTCDQ8NEC7 633 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 BHLHE22Q8NFJ8 381 aaPredicted RBP19.82■□□□□ 0.76
USP48-201ENST00000308271 DIS3LQ8TF46 1054 aaKnown RBP19.82■□□□□ 0.76
USP48-201ENST00000308271 PRR5-ARHGAP8B1AHC4 643 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 OCM2P0CE71 109 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 OCMP0CE72 109 aaPredicted RBP19.82■□□□□ 0.76
USP48-201ENST00000308271 MGAT1P26572 445 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 GNL1P36915 607 aaPredicted RBP19.82■□□□□ 0.76
USP48-201ENST00000308271 ARHGAP8P85298 464 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 UBAP2LQ14157 1087 aaKnown RBP19.82■□□□□ 0.76
USP48-201ENST00000308271 TAF2Q6P1X5 1199 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 WDR18Q9BV38 432 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 CADM1Q9BY67 442 aaKnown RBP19.82■□□□□ 0.76
USP48-201ENST00000308271 TMEM39BQ9GZU3 492 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 NMRAL1Q9HBL8 299 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 PKNOX1P55347 436 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 SPDYAQ5MJ70 313 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 ZPBP2Q6X784 338 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 TMEM161BQ8NDZ6 487 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 SNX19Q92543 992 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 RRN3Q9NYV6 651 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 SYNPO2Q9UMS6 1093 aa19.82■□□□□ 0.76
USP48-201ENST00000308271 FOXO6A8MYZ6 492 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 SUPT3HB4E1H0 165 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 GRIK5Q16478 980 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 C15orf52Q6ZUT6 534 aaKnown RBP19.81■□□□□ 0.76
USP48-201ENST00000308271 ACOT1Q86TX2 421 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 EZH1Q92800 747 aaPredicted RBP19.81■□□□□ 0.76
USP48-201ENST00000308271 FAM162AQ96A26 154 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 S100A14Q9HCY8 104 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 SIX2Q9NPC8 291 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 SATB2Q9UPW6 733 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 DCCP43146 1447 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 KPNA4O00629 521 aaPredicted RBP19.81■□□□□ 0.76
USP48-201ENST00000308271 GEMP55040 296 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 RPL7AP62424 266 aaKnown RBP19.81■□□□□ 0.76
USP48-201ENST00000308271 CDC42EP1Q00587 391 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 PGM5Q15124 567 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.81■□□□□ 0.76
USP48-201ENST00000308271 VAV3Q9UKW4 847 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 MRC1P22897 1456 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 PYGLP06737 847 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 ATP1A4Q13733 1029 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 MAGED4Q96JG8 741 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 CLUHO75153 1309 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 RPL14P50914 215 aaKnown RBP19.81■□□□□ 0.76
USP48-201ENST00000308271 ZACNQ401N2 412 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 PRMT9Q6P2P2 845 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 FAM131BQ86XD5 332 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 PRMT6Q96LA8 375 aaPredicted RBP19.81■□□□□ 0.76
USP48-201ENST00000308271 CATSPERBQ9H7T0 1116 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 CYP4F12Q9HCS2 524 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 XPNPEP3Q9NQH7 507 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 PRPF19Q9UMS4 504 aaKnown RBP19.81■□□□□ 0.76
USP48-201ENST00000308271 USP20Q9Y2K6 914 aa19.81■□□□□ 0.76
USP48-201ENST00000308271 CHD2O14647 1828 aaKnown RBP19.8■□□□□ 0.76
USP48-201ENST00000308271 TPP1O14773 563 aa19.8■□□□□ 0.76
USP48-201ENST00000308271 MRASO14807 208 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms