RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 KBTBD8Q8NFY9 601 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 EMILIN3Q9NT22 766 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 O00370 1275 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 PRCPP42785 496 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 GSSP48637 474 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 PACS1Q6VY07 963 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 PCDH18Q9HCL0 1135 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 GNPTGQ9UJJ9 305 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 LOC100653049A0A140TA62 436 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 ANXA6P08133 673 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 CCNHP51946 323 aaPredicted RBP11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 NFYCQ13952 458 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 LRRC34Q8IZ02 419 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 C4orf33Q8N1A6 199 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 METP08581 1390 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 RLN1P04808 185 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 ENO2P09104 434 aaPredicted RBP11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 CCND2P30279 289 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 RGS1Q08116 209 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 ZC2HC1CQ53FD0 456 aaPredicted RBP11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 TCHHL1Q5QJ38 904 aaPredicted RBP11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 SHCBP1LQ9BZQ2 653 aa11.46□□□□□ -0.57
HDGFL3-201ENST00000299633 AHCTF1Q8WYP5 2266 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 ALDH1A2O94788 518 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 FGRP09769 529 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 ATP5F1P24539 256 aaPredicted RBP11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 ZBTB33Q86T24 672 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 RAB43Q86YS6 212 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 PROM2Q8N271 834 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 MYLPFQ96A32 169 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 STK33Q9BYT3 514 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 PPEF1O14829 653 aaPredicted RBP11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 GPATCH4Q5T3I0 446 aaKnown RBP11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 ZNF605Q86T29 641 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 MMGT1Q8N4V1 131 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 STAP1Q9ULZ2 295 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 CD3EAPO15446 510 aaKnown RBP11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 TNFAIP1Q13829 316 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 DGCR6Q14129 220 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 ADSSL1Q8N142 457 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 TRPV5Q9NQA5 729 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 AXIN2Q9Y2T1 843 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 ZNF451Q9Y4E5 1061 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 CADP27708 2225 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 CNPP09543 421 aaKnown RBP11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 SDC4P31431 198 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 DSG3P32926 999 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 ZNF746Q6NUN9 644 aaPredicted RBP11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 CIR1Q86X95 450 aaPredicted RBP11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 RNF25Q96BH1 459 aaPredicted RBP11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 RBM15Q96T37 977 aaKnown RBP eCLIP11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 PPP1R16BQ96T49 567 aa11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 BSDC1Q9NW68 430 aaPredicted RBP11.46□□□□□ -0.58
HDGFL3-201ENST00000299633 HSD17B4P51659 736 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 NPEPPSP55786 919 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 CDC16Q13042 620 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 C2orf76Q3KRA6 126 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 RABL6Q3YEC7 729 aaPredicted RBP11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 NLRP10Q86W26 655 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 MYDGFQ969H8 173 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 CSPG5O95196 566 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 PSMC5P62195 406 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 KRT35Q92764 455 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 CAPN10Q9HC96 672 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 MOV10Q9HCE1 1003 aaKnown RBP11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 LRFN2Q9ULH4 789 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 ARHGAP31Q2M1Z3 1444 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 OMPP47874 163 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 MAPK10P53779 464 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 SPACA6W5XKT8 324 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 KIAA1210Q9ULL0 1709 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 IGSF1Q8N6C5 1336 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 ARL5CA6NH57 179 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 ATP9BO43861 1147 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 CDKL1Q00532 357 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 SLC34A1Q06495 639 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 ERFEQ4G0M1 354 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 TJP2Q9UDY2 1190 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 ANAPC2Q9UJX6 822 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 NEU2Q9Y3R4 380 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 CCNKO75909 580 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 ACTR2P61160 394 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 SLC20A2Q08357 652 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 MARK2Q7KZI7 788 aaKnown RBP11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 TBC1D10CQ8IV04 446 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 MARK1Q9P0L2 795 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 NUDT5Q9UKK9 219 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 SPTBN1Q01082 2364 aaKnown RBP11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 H3BN98 237 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 IREB2P48200 963 aaKnown RBP11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 NME3Q13232 169 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 MAGEE2Q8TD90 523 aaPredicted RBP11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 MED11Q9P086 117 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 RABL2BQ9UNT1 228 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 C2orf74A8MZ97 194 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 ACCSLQ4AC99 568 aa11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 CLP1Q92989 425 aaKnown RBP11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 POLR2AP24928 1970 aaKnown RBP11.45□□□□□ -0.58
HDGFL3-201ENST00000299633 DOCK6Q96HP0 2047 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms