RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 RASAL3Q86YV0 1011 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 FAM98AQ8NCA5 519 aaKnown RBP5.1□□□□□ -1.59
CCDC54-201ENST00000261058 GPR150Q8NGU9 434 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 CAGE1Q8TC20 777 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 GLMPQ8WWB7 406 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 SARAFQ96BY9 339 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 MACROD1Q9BQ69 325 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 ITM2CQ9NQX7 267 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 SAGE1Q9NXZ1 904 aa5.1□□□□□ -1.59
CCDC54-201ENST00000261058 CCNL1Q9UK58 526 aaPredicted RBP5.1□□□□□ -1.59
CCDC54-201ENST00000261058 C19orf53Q9UNZ5 99 aaPredicted RBP5.1□□□□□ -1.59
CCDC54-201ENST00000261058 TCRBV5S1A1TA0A578 114 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 SLC38A8A6NNN8 435 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 C1QL1O75973 258 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 SLPIP03973 132 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 MATN1P21941 496 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 YY1P25490 414 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 AKT1P31749 480 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 CLK3P49761 638 aaKnown RBP5.09□□□□□ -1.59
CCDC54-201ENST00000261058 TXNL4AP83876 142 aaKnown RBP5.09□□□□□ -1.59
CCDC54-201ENST00000261058 AAK1Q2M2I8 961 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 ERCC6LQ2NKX8 1250 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 C16orf89Q6UX73 402 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 SLC29A4Q7RTT9 530 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 HERC6Q8IVU3 1022 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 CCDC117Q8IWD4 279 aaPredicted RBP5.09□□□□□ -1.59
CCDC54-201ENST00000261058 SMAP1Q8IYB5 467 aaPredicted RBP5.09□□□□□ -1.59
CCDC54-201ENST00000261058 TERB1Q8NA31 727 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 SLC16A11Q8NCK7 471 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 OR52L2PQ8NGH6 319 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 MMS19Q96T76 1030 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 AGAP2Q99490 1192 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 DUSP26Q9BV47 211 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 MECRQ9BV79 373 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 CINPQ9BW66 212 aaPredicted RBP5.09□□□□□ -1.59
CCDC54-201ENST00000261058 CIPCQ9C0C6 399 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 ABHD16BQ9H3Z7 469 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 PRDM13Q9H4Q3 707 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 G6PC2Q9NQR9 355 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 SEMA4GQ9NTN9 838 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 PGAP2Q9UHJ9 254 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 SPATA31A1Q5TZJ5 1347 aa5.09□□□□□ -1.59
CCDC54-201ENST00000261058 EFCAB8A8MWE9 144 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 KIF28PB7ZC32 967 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 B9A039 149 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 H0Y3Z8 333 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 NKX2-8O15522 239 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 IRAK2O43187 625 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 PPP6R2O75170 966 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 ALADP13716 330 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 DUSP1P28562 367 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 IGHMBP2P38935 993 aaKnown RBP5.08□□□□□ -1.6
CCDC54-201ENST00000261058 PRKAA2P54646 552 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 RAE1P78406 368 aaKnown RBP5.08□□□□□ -1.6
CCDC54-201ENST00000261058 CCDC15Q0P6D6 951 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 SF3A3Q12874 501 aaKnown RBP eCLIP5.08□□□□□ -1.6
CCDC54-201ENST00000261058 SMAD1Q15797 465 aaKnown RBP5.08□□□□□ -1.6
CCDC54-201ENST00000261058 TIGD6Q17RP2 521 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 FBXO47Q5MNV8 452 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 TSTD2Q5T7W7 516 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 RINLQ6ZS11 566 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 ANKRD18AQ8IVF6 992 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 P3H2Q8IVL5 708 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 OR6Y1Q8NGX8 325 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 RNF26Q9BY78 433 aaPredicted RBP5.08□□□□□ -1.6
CCDC54-201ENST00000261058 CDCP1Q9H5V8 836 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 ABHD10Q9NUJ1 306 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 FBXO28Q9NVF7 368 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 KIF17Q9P2E2 1029 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 ARPP21Q9UBL0 812 aaPredicted RBP5.08□□□□□ -1.6
CCDC54-201ENST00000261058 SERGEFQ9UGK8 458 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 TLK1Q9UKI8 766 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 LZTS1Q9Y250 596 aa5.08□□□□□ -1.6
CCDC54-201ENST00000261058 FAM90A20PA6NIJ5 464 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 TARM1B6A8C7 271 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 M0QYT0 321 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 JTBO76095 146 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 MT-CO3P00414 261 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 TK1P04183 234 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 HNRNPCP07910 306 aaKnown RBP eCLIP5.07□□□□□ -1.6
CCDC54-201ENST00000261058 CYP3A4P08684 503 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 CYP21A2P08686 494 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 ZNF37AP17032 561 aaPredicted RBP5.07□□□□□ -1.6
CCDC54-201ENST00000261058 IGFBP2P18065 325 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 GALNSP34059 522 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 FOXL2P58012 376 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 FAM3BP58499 235 aaPredicted RBP5.07□□□□□ -1.6
CCDC54-201ENST00000261058 HOXA4Q00056 320 aaPredicted RBP5.07□□□□□ -1.6
CCDC54-201ENST00000261058 BFSP2Q13515 415 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 TAF5Q15542 800 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 FAM153CQ494X1 144 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 GALNTL6Q49A17 601 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 CYP26C1Q6V0L0 522 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 SLC2A12Q8TD20 617 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 TRMT61AQ96FX7 289 aaKnown RBP5.07□□□□□ -1.6
CCDC54-201ENST00000261058 FAR2Q96K12 515 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 TRAPPC9Q96Q05 1148 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 KLK15Q9H2R5 256 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 IKZF4Q9H2S9 585 aa5.07□□□□□ -1.6
CCDC54-201ENST00000261058 NDUFAF4Q9P032 175 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms