RNA–Protein interactions for RNA: ENST00000259216.4

CFC1-201, Transcript of cripto, FRL-1, cryptic family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFC1, Length 1,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFC1-201ENST00000259216 SMYD5Q6GMV2 418 aa21.14■□□□□ 0.97
CFC1-201ENST00000259216 PRR23CQ6ZRP0 262 aa21.14■□□□□ 0.97
CFC1-201ENST00000259216 RNF139Q8WU17 664 aa21.14■□□□□ 0.97
CFC1-201ENST00000259216 PIWIL1Q96J94 861 aaKnown RBP21.14■□□□□ 0.97
CFC1-201ENST00000259216 GABRG3Q99928 467 aa21.14■□□□□ 0.97
CFC1-201ENST00000259216 INVSQ9Y283 1065 aa21.14■□□□□ 0.97
CFC1-201ENST00000259216 RALGAPA1Q6GYQ0 2036 aa21.14■□□□□ 0.97
CFC1-201ENST00000259216 PAPSS1O43252 624 aaPredicted RBP21.13■□□□□ 0.97
CFC1-201ENST00000259216 LETM1O95202 739 aaPredicted RBP21.13■□□□□ 0.97
CFC1-201ENST00000259216 LATS1O95835 1130 aa21.13■□□□□ 0.97
CFC1-201ENST00000259216 NTSR1P30989 418 aa21.13■□□□□ 0.97
CFC1-201ENST00000259216 P2RY2P41231 377 aa21.13■□□□□ 0.97
CFC1-201ENST00000259216 MTIF2P46199 727 aaKnown RBP21.13■□□□□ 0.97
CFC1-201ENST00000259216 ENPP2Q13822 863 aa21.13■□□□□ 0.97
CFC1-201ENST00000259216 PUM1Q14671 1186 aaKnown RBP eCLIP21.13■□□□□ 0.97
CFC1-201ENST00000259216 GEN1Q17RS7 908 aa21.13■□□□□ 0.97
CFC1-201ENST00000259216 MAP7D1Q3KQU3 841 aa21.13■□□□□ 0.97
CFC1-201ENST00000259216 PMS2CLQ68D20 193 aa21.13■□□□□ 0.97
CFC1-201ENST00000259216 SCUBE3Q8IX30 993 aa21.13■□□□□ 0.97
CFC1-201ENST00000259216 WDTC1Q8N5D0 677 aa21.13■□□□□ 0.97
CFC1-201ENST00000259216 ARRDC1-AS1Q9H2J1 176 aa21.13■□□□□ 0.97
CFC1-201ENST00000259216 PCDHGA5Q9Y5G8 931 aa21.13■□□□□ 0.97
CFC1-201ENST00000259216 PRR5-ARHGAP8B1AHC4 643 aa21.12■□□□□ 0.97
CFC1-201ENST00000259216 GABRG2P18507 467 aa21.12■□□□□ 0.97
CFC1-201ENST00000259216 HOXD9P28356 352 aaPredicted RBP21.12■□□□□ 0.97
CFC1-201ENST00000259216 GNA15P30679 374 aa21.12■□□□□ 0.97
CFC1-201ENST00000259216 ARHGAP8P85298 464 aa21.12■□□□□ 0.97
CFC1-201ENST00000259216 KCNMA1Q12791 1236 aa21.12■□□□□ 0.97
CFC1-201ENST00000259216 KIAA1211LQ6NV74 962 aa21.12■□□□□ 0.97
CFC1-201ENST00000259216 BEND5Q7L4P6 421 aa21.12■□□□□ 0.97
CFC1-201ENST00000259216 ERMP1Q7Z2K6 904 aa21.12■□□□□ 0.97
CFC1-201ENST00000259216 TRMT11Q7Z4G4 463 aaKnown RBP21.12■□□□□ 0.97
CFC1-201ENST00000259216 TMEM110Q86TL2 294 aa21.12■□□□□ 0.97
CFC1-201ENST00000259216 CREBRFQ8IUR6 639 aa21.12■□□□□ 0.97
CFC1-201ENST00000259216 FRMD1Q8N878 549 aa21.12■□□□□ 0.97
CFC1-201ENST00000259216 DQX1Q8TE96 717 aaKnown RBP21.12■□□□□ 0.97
CFC1-201ENST00000259216 FAM81BQ96LP2 452 aa21.12■□□□□ 0.97
CFC1-201ENST00000259216 MIS12Q9H081 205 aa21.12■□□□□ 0.97
CFC1-201ENST00000259216 NDST4Q9H3R1 872 aa21.12■□□□□ 0.97
CFC1-201ENST00000259216 SAMSN1Q9NSI8 373 aaKnown RBP21.12■□□□□ 0.97
CFC1-201ENST00000259216 TJP2Q9UDY2 1190 aa21.12■□□□□ 0.97
CFC1-201ENST00000259216 TCRBV21S2A2A0A5A6 115 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 ZNF806P0C7X5 589 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 HOXB2P14652 356 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 WASP42768 502 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 HARS2P49590 506 aaKnown RBP21.11■□□□□ 0.97
CFC1-201ENST00000259216 SGSHP51688 502 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 RING1Q06587 406 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 CCDC6Q16204 474 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 ARHGAP44Q17R89 818 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 VWA3BQ502W6 1294 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 USP39Q53GS9 565 aaKnown RBP21.11■□□□□ 0.97
CFC1-201ENST00000259216 HSP90AA4PQ58FG1 418 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 FAM133BQ5BKY9 247 aaKnown RBP21.11■□□□□ 0.97
CFC1-201ENST00000259216 CT47A1Q5JQC4 288 aaPredicted RBP21.11■□□□□ 0.97
CFC1-201ENST00000259216 ADGRF1Q5T601 910 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 TMEM215Q68D42 235 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 NUDT18Q6ZVK8 323 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 RLN3Q8WXF3 142 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 SLC39A13Q96H72 371 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 TUBGCP2Q9BSJ2 902 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 SLC2A11Q9BYW1 496 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 POLMQ9NP87 494 aaPredicted RBP21.11■□□□□ 0.97
CFC1-201ENST00000259216 RXFP3Q9NSD7 469 aa21.11■□□□□ 0.97
CFC1-201ENST00000259216 MBD1Q9UIS9 605 aaPredicted RBP21.11■□□□□ 0.97
CFC1-201ENST00000259216 E5RJQ4 531 aa21.1■□□□□ 0.97
CFC1-201ENST00000259216 THAP12O43422 761 aa21.1■□□□□ 0.97
CFC1-201ENST00000259216 ALDH1A2O94788 518 aa21.1■□□□□ 0.97
CFC1-201ENST00000259216 PNMA6AP0CW24 399 aaPredicted RBP21.1■□□□□ 0.97
CFC1-201ENST00000259216 MPLP40238 635 aa21.1■□□□□ 0.97
CFC1-201ENST00000259216 ACADSBP45954 432 aa21.1■□□□□ 0.97
CFC1-201ENST00000259216 PDCLQ13371 301 aa21.1■□□□□ 0.97
CFC1-201ENST00000259216 SF3A2Q15428 464 aaKnown RBP21.1■□□□□ 0.97
CFC1-201ENST00000259216 SYPL2Q5VXT5 272 aa21.1■□□□□ 0.97
CFC1-201ENST00000259216 NADSYN1Q6IA69 706 aa21.1■□□□□ 0.97
CFC1-201ENST00000259216 FAM114A1Q8IWE2 563 aa21.1■□□□□ 0.97
CFC1-201ENST00000259216 HMGB4Q8WW32 186 aa21.1■□□□□ 0.97
CFC1-201ENST00000259216 FCRL2Q96LA5 508 aaPredicted RBP21.1■□□□□ 0.97
CFC1-201ENST00000259216 CACNA2D2Q9NY47 1150 aa21.1■□□□□ 0.97
CFC1-201ENST00000259216 DNAJC12Q9UKB3 198 aa21.1■□□□□ 0.97
CFC1-201ENST00000259216 PCDHGC3Q9UN70 934 aa21.1■□□□□ 0.97
CFC1-201ENST00000259216 NAALADL1Q9UQQ1 740 aa21.1■□□□□ 0.97
CFC1-201ENST00000259216 DNAH14Q0VDD8 3507 aa21.09■□□□□ 0.97
CFC1-201ENST00000259216 NCOR2Q9Y618 2525 aa21.09■□□□□ 0.97
CFC1-201ENST00000259216 BCLAF3A2AJT9 711 aaKnown RBP21.09■□□□□ 0.97
CFC1-201ENST00000259216 WASH3PC4AMC7 463 aa21.09■□□□□ 0.97
CFC1-201ENST00000259216 FOXN3O00409 490 aaPredicted RBP21.09■□□□□ 0.97
CFC1-201ENST00000259216 MED7O43513 233 aa21.09■□□□□ 0.97
CFC1-201ENST00000259216 GDF9O60383 454 aa21.09■□□□□ 0.97
CFC1-201ENST00000259216 IGLV3-25P01717 112 aa21.09■□□□□ 0.97
CFC1-201ENST00000259216 SLC6A4P31645 630 aa21.09■□□□□ 0.97
CFC1-201ENST00000259216 CLCN1P35523 988 aa21.09■□□□□ 0.97
CFC1-201ENST00000259216 ATXN1P54253 815 aaKnown RBP21.09■□□□□ 0.97
CFC1-201ENST00000259216 NNTQ13423 1086 aa21.09■□□□□ 0.97
CFC1-201ENST00000259216 EIF4EBP2Q13542 120 aaPredicted RBP21.09■□□□□ 0.97
CFC1-201ENST00000259216 ELF2Q15723 593 aa21.09■□□□□ 0.97
CFC1-201ENST00000259216 TPD52L1Q16890 204 aaPredicted RBP21.09■□□□□ 0.97
CFC1-201ENST00000259216 FAM71AQ8IYT1 594 aa21.09■□□□□ 0.97
CFC1-201ENST00000259216 CHPFQ8IZ52 775 aa21.09■□□□□ 0.97
CFC1-201ENST00000259216 IPO4Q8TEX9 1081 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms