RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 FAPQ12884 760 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 ACAP2Q15057 778 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 RABL6Q3YEC7 729 aaPredicted RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 GALNT6Q8NCL4 622 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 LRRC20Q8TCA0 184 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 HDAC2Q92769 488 aaKnown RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 ACSF2Q96CM8 615 aaPredicted RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 REXO5Q96IC2 774 aaKnown RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 ART5Q96L15 291 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 EPB41L1Q9H4G0 881 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 DUSP12Q9UNI6 340 aa11.39□□□□□ -0.59
MSH6-201ENST00000234420 MRPS7Q9Y2R9 242 aaKnown RBP11.39□□□□□ -0.59
MSH6-201ENST00000234420 PARD3Q8TEW0 1356 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 PBRM1Q86U86 1689 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 HEATR9A2RTY3 570 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 CBFA2T3O75081 653 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 ODC1P11926 461 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 CTXN3Q4LDR2 81 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 DEFB107AQ8IZN7 70 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 TTC29Q8NA56 475 aaPredicted RBP11.38□□□□□ -0.59
MSH6-201ENST00000234420 STK33Q9BYT3 514 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 STOML2Q9UJZ1 356 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 ZNRF3Q9ULT6 936 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 TRIM64A6NGJ6 449 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 LARGE1O95461 756 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 CCT8P50990 548 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 AMPD2Q01433 879 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 SLC13A5Q86YT5 568 aaPredicted RBP11.38□□□□□ -0.59
MSH6-201ENST00000234420 FNIP1Q8TF40 1166 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 RNF31Q96EP0 1072 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 GSDMCQ9BYG8 508 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 SIK3Q9Y2K2 1263 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 RBM7Q9Y580 266 aaKnown RBP11.38□□□□□ -0.59
MSH6-201ENST00000234420 UTYO14607 1347 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 SMCO3A2RU48 225 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 SEC24AO95486 1093 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 ALDH2P05091 517 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 ERCC2P18074 760 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 FGFR3P22607 806 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 HSF2Q03933 536 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 SGF29Q96ES7 293 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 ZNF285Q96NJ3 590 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 C7orf25Q9BPX7 421 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 PLGRKTQ9HBL7 147 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 RGS18Q9NS28 235 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 EFR3BQ9Y2G0 817 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 NUP160Q12769 1436 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 LTKP29376 864 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 SERPINB9P50453 376 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 BST2Q10589 180 aaKnown RBP11.38□□□□□ -0.59
MSH6-201ENST00000234420 PKN2Q16513 984 aaKnown RBP11.38□□□□□ -0.59
MSH6-201ENST00000234420 S100ZQ8WXG8 99 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 RFFLQ8WZ73 363 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 CNPPD1Q9BV87 410 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 ROPN1BQ9BZX4 212 aaPredicted RBP11.38□□□□□ -0.59
MSH6-201ENST00000234420 ROPN1Q9HAT0 212 aaPredicted RBP11.38□□□□□ -0.59
MSH6-201ENST00000234420 TLR8Q9NR97 1041 aaKnown RBP11.38□□□□□ -0.59
MSH6-201ENST00000234420 MYO5CQ9NQX4 1742 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 FAM25EA8MYX2 175 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 STMND1H3BQB6 276 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 CBX4O00257 560 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 PTPN4P29074 926 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 ADSLP30566 484 aaPredicted RBP11.38□□□□□ -0.59
MSH6-201ENST00000234420 ZNF671Q8TAW3 534 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 RNF26Q9BY78 433 aaPredicted RBP11.38□□□□□ -0.59
MSH6-201ENST00000234420 VPS28Q9UK41 221 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 MINPP1Q9UNW1 487 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 F5H6K3 240 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 AXIN1O15169 862 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 RBMXL2O75526 392 aaKnown RBP11.38□□□□□ -0.59
MSH6-201ENST00000234420 GALK1P51570 392 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 THOP1P52888 689 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 VBP1P61758 197 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 KLRC3Q07444 240 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 TUBA3CQ13748 450 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 NRF1Q16656 503 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 GRIN3AQ8TCU5 1115 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 NEK7Q8TDX7 302 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 WDCPQ9H6R7 721 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 TRMT13Q9NUP7 481 aaKnown RBP11.38□□□□□ -0.59
MSH6-201ENST00000234420 CMTM6Q9NX76 183 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 LCMT1Q9UIC8 334 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 SLC12A4Q9UP95 1085 aa11.38□□□□□ -0.59
MSH6-201ENST00000234420 NR5A2O00482 541 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 TIMM44O43615 452 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 PRAMEF19Q5SWL8 479 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 IRGCQ6NXR0 463 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 ATXN10Q9UBB4 475 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 MROH7Q68CQ1 1323 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 EXTL3O43909 919 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 FOSL1P15407 271 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 FASP25445 335 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 CAMK1Q14012 370 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 SV2CQ496J9 727 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 EPS8L3Q8TE67 593 aaKnown RBP11.37□□□□□ -0.59
MSH6-201ENST00000234420 KCTD4Q8WVF5 259 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 IDI2Q9BXS1 227 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 ILKAPQ9H0C8 392 aaPredicted RBP11.37□□□□□ -0.59
MSH6-201ENST00000234420 SEMA6AQ9H2E6 1030 aa11.37□□□□□ -0.59
MSH6-201ENST00000234420 DNAJC11Q9NVH1 559 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms