RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 LRRC52Q8N7C0 313 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 NSUN7Q8NE18 718 aaKnown RBP11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 CACTINQ8WUQ7 758 aaKnown RBP11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 OVCA2Q8WZ82 227 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 DEPDC7Q96QD5 511 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 GDAP2Q9NXN4 497 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 MARK1Q9P0L2 795 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 CHORDC1Q9UHD1 332 aaPredicted RBP11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 LSM7Q9UK45 103 aaKnown RBP11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 AGO2Q9UKV8 859 aaKnown RBP11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 ANK1P16157 1881 aa11.65□□□□□ -0.54
PTP4A1-207ENST00000639568 UTP20O75691 2785 aaKnown RBP11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 K7ENM7 598 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 KRT38O76015 456 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 RTN3O95197 1032 aaPredicted RBP11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 PDGFRBP09619 1106 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 ACP1P24666 158 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 LMO2P25791 158 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 EPHA8P29322 1005 aaPredicted RBP11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 TUBP50607 506 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 ST3GAL1Q11201 340 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 SOWAHAQ2M3V2 549 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 SERPINA13PQ6UXR4 307 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 NUP93Q8N1F7 819 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 OR2T3Q8NH03 318 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 PCED1BQ96HM7 432 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 CCSER2Q9H7U1 834 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 CRTAC1Q9NQ79 661 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 AASDHPPTQ9NRN7 309 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 PDRG1Q9NUG6 133 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 PLK2Q9NYY3 685 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 KCND2Q9NZV8 630 aa11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 MYO18AQ92614 2054 aaKnown RBP11.64□□□□□ -0.55
PTP4A1-207ENST00000639568 AHCTF1Q8WYP5 2266 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 USP9YO00507 2555 aaPredicted RBP11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 FAM47DPA6NHR8 397 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 DNTTP04053 509 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 ACO1P21399 889 aaKnown RBP11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 ABCD1P33897 745 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 RBP5P82980 135 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 DAB2P98082 770 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 POU5F1Q01860 360 aaKnown RBP11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 ENPP2Q13822 863 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 ZNF234Q14588 700 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 SHBQ15464 509 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 ZSCAN23Q3MJ62 389 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 HS1BP3Q53T59 392 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 DPH6Q7L8W6 267 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 MYCT1Q8N699 235 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 MYCBPAPQ8TBZ2 947 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 WBP2Q969T9 261 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 SLC6A18Q96N87 628 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 CIPCQ9C0C6 399 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 SGK2Q9HBY8 427 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 LRRC4CQ9HCJ2 640 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 ITGA11Q9UKX5 1188 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 MAN2B2Q9Y2E5 1009 aa11.63□□□□□ -0.55
PTP4A1-207ENST00000639568 NPHP3-ACAD11A0A0J9YXS1 232 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 PFKFB2O60825 505 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 CTDNEP1O95476 244 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 FDPSP14324 419 aaKnown RBP11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 PRKCHP24723 683 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 CD38P28907 300 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 AFMP43652 599 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 BNIP3Q12983 259 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 GEN1Q17RS7 908 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 ARL13BQ3SXY8 428 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 TTC31Q49AM3 519 aaPredicted RBP11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 SLC45A4Q5BKX6 768 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 MDH1BQ5I0G3 518 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 KIAA0895LQ68EN5 471 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 SLC39A4Q6P5W5 647 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 KCNK18Q7Z418 384 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 OXR1Q8N573 874 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 IGSF22Q8N9C0 903 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 C1orf127Q8N9H9 656 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 SYT2Q8N9I0 419 aaPredicted RBP11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 GANCQ8TET4 914 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 KCNN1Q92952 543 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 CCNL2Q96S94 520 aaPredicted RBP11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 ELOVL4Q9GZR5 314 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 ABCG4Q9H172 646 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 ASCL3Q9NQ33 180 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 ELOVL2Q9NXB9 296 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 NCKAP1Q9Y2A7 1128 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 SLC27A6Q9Y2P4 619 aa11.62□□□□□ -0.55
PTP4A1-207ENST00000639568 A0A1W2PPC4 97 aa11.61□□□□□ -0.55
PTP4A1-207ENST00000639568 PP2D1A8MPX8 630 aa11.61□□□□□ -0.55
PTP4A1-207ENST00000639568 ANKRD63C9JTQ0 380 aa11.61□□□□□ -0.55
PTP4A1-207ENST00000639568 CSO75390 466 aaKnown RBP11.61□□□□□ -0.55
PTP4A1-207ENST00000639568 MFAP3P55082 362 aa11.61□□□□□ -0.55
PTP4A1-207ENST00000639568 ASIC1P78348 528 aa11.61□□□□□ -0.55
PTP4A1-207ENST00000639568 ZBTB16Q05516 673 aa11.61□□□□□ -0.55
PTP4A1-207ENST00000639568 LINC00303Q3SY05 128 aa11.61□□□□□ -0.55
PTP4A1-207ENST00000639568 TTC38Q5R3I4 469 aa11.61□□□□□ -0.55
PTP4A1-207ENST00000639568 SNX30Q5VWJ9 437 aa11.61□□□□□ -0.55
PTP4A1-207ENST00000639568 USP53Q70EK8 1073 aa11.61□□□□□ -0.55
PTP4A1-207ENST00000639568 POMGNT1Q8WZA1 660 aa11.61□□□□□ -0.55
PTP4A1-207ENST00000639568 PSMG3-AS1Q96PY0 264 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms