RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 EXOC3O60645 756 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 ASGR2P07307 311 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 RPS2P15880 293 aaKnown RBP12.08□□□□□ -0.48
LINC00538-201ENST00000626109 TMPRSS15P98073 1019 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 KYAT1Q16773 422 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 TTMPQ5BVD1 217 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 FAM205BPQ63HN1 556 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 ATCAYQ86WG3 371 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 HACE1Q8IYU2 909 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 GPD1LQ8N335 351 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 RASGEF1CQ8N431 466 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 XXYLT1Q8NBI6 393 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 EPS8L3Q8TE67 593 aaKnown RBP12.08□□□□□ -0.48
LINC00538-201ENST00000626109 ARL8AQ96BM9 186 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 SGCZQ96LD1 299 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 EIF2AQ9BY44 585 aaKnown RBP12.08□□□□□ -0.48
LINC00538-201ENST00000626109 SIX2Q9NPC8 291 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 C1orf112Q9NSG2 853 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 FAM105AQ9NUU6 356 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 TTC7AQ9ULT0 858 aaPredicted RBP12.08□□□□□ -0.48
LINC00538-201ENST00000626109 MYH10P35580 1976 aa12.08□□□□□ -0.48
LINC00538-201ENST00000626109 LRRC72A6NJI9 287 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 SRRM3A6NNA2 597 aaPredicted RBP12.07□□□□□ -0.48
LINC00538-201ENST00000626109 EXTL3O43909 919 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 MGEA5O60502 916 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 TMEM253P0C7T8 217 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 CD9P21926 228 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 FMO5P49326 533 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 CASP4P49662 377 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 IKBKEQ14164 716 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 MAJINQ3KP22 176 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 SPDYCQ5MJ68 293 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 UBXN11Q5T124 520 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 KAZNQ674X7 775 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 MICALCLQ6ZW33 695 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 THNSL1Q8IYQ7 743 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 RNF168Q8IYW5 571 aaPredicted RBP12.07□□□□□ -0.48
LINC00538-201ENST00000626109 ZNF619Q8N2I2 560 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 PPM1NQ8N819 430 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 TMEM174Q8WUU8 243 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 CTNNBL1Q8WYA6 563 aaPredicted RBP12.07□□□□□ -0.48
LINC00538-201ENST00000626109 SAAL1Q96ER3 474 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 ATP6V1G3Q96LB4 118 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 COG8Q96MW5 612 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 HAPLN2Q9GZV7 340 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 RGS18Q9NS28 235 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 DMAC2Q9NW81 257 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 NENFQ9UMX5 172 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 UTP11Q9Y3A2 253 aaKnown RBP12.07□□□□□ -0.48
LINC00538-201ENST00000626109 PCDHGB5Q9Y5G0 923 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 SCN5AQ14524 2016 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 LTBP2Q14767 1821 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 GOLGA8IPA6NC78 632 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 ZNF233A6NK53 670 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 GOLGA8JA6NMD2 632 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 EFCAB14O75071 495 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 TBX18O95935 607 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 KRT14P02533 472 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 APOA4P06727 396 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 FAM153BP0C7A2 387 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 MYZAPP0CAP1 466 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 ACRP10323 421 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 P4HA1P13674 534 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 PRSS12P56730 875 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 IL1RL1Q01638 556 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 OASLQ15646 514 aaKnown RBP12.07□□□□□ -0.48
LINC00538-201ENST00000626109 FAM153CQ494X1 144 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 SLC24A5Q71RS6 500 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 COLGALT2Q8IYK4 626 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 PHTF2Q8N3S3 785 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 ADAMTS18Q8TE60 1221 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 LINC01599Q8WXQ3 324 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 FAM213AQ9BRX8 229 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 CCDC68Q9H2F9 335 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 RABEP2Q9H5N1 569 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 FAM114A2Q9NRY5 505 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 FAM153AQ9UHL3 310 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 PCDHB2Q9Y5E7 798 aa12.07□□□□□ -0.48
LINC00538-201ENST00000626109 GOLGA6L10A0A0M3HER8 536 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 A0A0U1RQF3 1178 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 DDX3XO00571 662 aaKnown RBP eCLIP12.06□□□□□ -0.48
LINC00538-201ENST00000626109 FRS3O43559 492 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 THEGLP0DJG4 465 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 NR1D1P20393 614 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 GRM5P41594 1212 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 ACOT2P49753 483 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 GALCP54803 685 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 C21orf58P58505 322 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 OSTNP61366 133 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 PSRC1Q6PGN9 363 aaPredicted RBP12.06□□□□□ -0.48
LINC00538-201ENST00000626109 TMEM110Q86TL2 294 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 NT5DC3Q86UY8 548 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 SLC30A5Q8TAD4 765 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 RFFLQ8WZ73 363 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 HES6Q96HZ4 224 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 TTPALQ9BTX7 342 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 RAB17Q9H0T7 212 aa12.06□□□□□ -0.48
LINC00538-201ENST00000626109 NXF3Q9H4D5 531 aaKnown RBP12.06□□□□□ -0.48
LINC00538-201ENST00000626109 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.06□□□□□ -0.48
LINC00538-201ENST00000626109 ZMYM5Q9UJ78 669 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms