RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 SNX9Q9Y5X1 595 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 CSADQ9Y600 493 aa12.22□□□□□ -0.45
C11orf54-215ENST00000617482 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.21□□□□□ -0.45
C11orf54-215ENST00000617482 PAPSS1O43252 624 aaPredicted RBP12.21□□□□□ -0.45
C11orf54-215ENST00000617482 GABBR2O75899 941 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 KRT38O76015 456 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 SLC26A2P50443 739 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 AQP5P55064 265 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 CRADDP78560 199 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 SLC6A3Q01959 620 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 KDSRQ06136 332 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 KCTD2Q14681 263 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 SMAD1Q15797 465 aaKnown RBP12.21□□□□□ -0.45
C11orf54-215ENST00000617482 SNX30Q5VWJ9 437 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 C7orf31Q8N865 590 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.21□□□□□ -0.45
C11orf54-215ENST00000617482 PDCD7Q8N8D1 485 aaKnown RBP12.21□□□□□ -0.45
C11orf54-215ENST00000617482 NETO2Q8NC67 525 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 CLEC4CQ8WTT0 213 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 NRG4Q8WWG1 115 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 NLRP7Q8WX94 980 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 SIGLEC10Q96LC7 697 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 MMP19Q99542 508 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 ARHGEF4Q9NR80 690 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 NMRK1Q9NWW6 199 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 KCNK4Q9NYG8 393 aa12.21□□□□□ -0.45
C11orf54-215ENST00000617482 PPEF2O14830 753 aa12.21□□□□□ -0.46
C11orf54-215ENST00000617482 NVLO15381 856 aaKnown RBP12.21□□□□□ -0.46
C11orf54-215ENST00000617482 HCRTO43612 131 aa12.21□□□□□ -0.46
C11orf54-215ENST00000617482 TBX10O75333 385 aa12.21□□□□□ -0.46
C11orf54-215ENST00000617482 THOC5Q13769 683 aaKnown RBP12.21□□□□□ -0.46
C11orf54-215ENST00000617482 TSNAXIP1Q2TAA8 658 aa12.21□□□□□ -0.46
C11orf54-215ENST00000617482 ATG16L1Q676U5 607 aa12.21□□□□□ -0.46
C11orf54-215ENST00000617482 ZNF534Q76KX8 674 aa12.21□□□□□ -0.46
C11orf54-215ENST00000617482 SMC1BQ8NDV3 1235 aa12.21□□□□□ -0.46
C11orf54-215ENST00000617482 DEPDC1BQ8WUY9 529 aa12.21□□□□□ -0.46
C11orf54-215ENST00000617482 TEKT4Q8WW24 435 aa12.21□□□□□ -0.46
C11orf54-215ENST00000617482 EBNA1BP2Q99848 306 aaKnown RBP12.21□□□□□ -0.46
C11orf54-215ENST00000617482 NFKBIZQ9BYH8 718 aa12.21□□□□□ -0.46
C11orf54-215ENST00000617482 FRMD8Q9BZ67 464 aaPredicted RBP12.21□□□□□ -0.46
C11orf54-215ENST00000617482 SLC17A6Q9P2U8 582 aa12.21□□□□□ -0.46
C11orf54-215ENST00000617482 ITGA11Q9UKX5 1188 aa12.21□□□□□ -0.46
C11orf54-215ENST00000617482 KIAA1257Q9ULG3 409 aa12.21□□□□□ -0.46
C11orf54-215ENST00000617482 CORO1CQ9ULV4 474 aaPredicted RBP12.21□□□□□ -0.46
C11orf54-215ENST00000617482 EVPLQ92817 2033 aa12.21□□□□□ -0.46
C11orf54-215ENST00000617482 PSMG1O95456 288 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 ALDH18A1P54886 795 aaKnown RBP12.2□□□□□ -0.46
C11orf54-215ENST00000617482 OCRLQ01968 901 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 FAM187BQ17R55 369 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 CASC4Q6P4E1 433 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 KCNT2Q6UVM3 1135 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 LMNTD2Q8IXW0 634 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 GSDMBQ8TAX9 411 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 SCG3Q8WXD2 468 aaKnown RBP12.2□□□□□ -0.46
C11orf54-215ENST00000617482 STMN2Q93045 179 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 CLMNQ96JQ2 1002 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 FAM161BQ96MY7 647 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 C7orf26Q96N11 449 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 RILPQ96NA2 401 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 SIRPGQ9P1W8 387 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 ZFATQ9P243 1243 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 RBPJLQ9UBG7 517 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 MFHAS1Q9Y4C4 1052 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 NME7Q9Y5B8 376 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 ANK1P16157 1881 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 BRCA1P38398 1863 aaKnown RBP12.2□□□□□ -0.46
C11orf54-215ENST00000617482 A6NHS1 94 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 A6NJR5 290 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 CAPN14A8MX76 684 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 LIN7AO14910 233 aaPredicted RBP12.2□□□□□ -0.46
C11orf54-215ENST00000617482 IL1BP01584 269 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 ZNF286BP0CG31 522 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 AMPD1P23109 780 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 L1CAMP32004 1257 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 VHLP40337 213 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 MAGEA6P43360 314 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 TEX44Q53QW1 395 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 C16orf46Q6P387 395 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 DENND5BQ6ZUT9 1274 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 CRLF3Q8IUI8 442 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 TRIM42Q8IWZ5 723 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 ADGRF2Q8IZF7 708 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 RBM15BQ8NDT2 890 aaKnown RBP12.2□□□□□ -0.46
C11orf54-215ENST00000617482 MCUQ8NE86 351 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 SLC35F5Q8WV83 523 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 ZNF333Q96JL9 665 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 CLPTM1LQ96KA5 538 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 ZNF670Q9BS34 389 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 GINS2Q9Y248 185 aa12.2□□□□□ -0.46
C11orf54-215ENST00000617482 DPPA5A6NC42 116 aa12.19□□□□□ -0.46
C11orf54-215ENST00000617482 FAM159BA6NKW6 160 aa12.19□□□□□ -0.46
C11orf54-215ENST00000617482 DPYSL4O14531 572 aa12.19□□□□□ -0.46
C11orf54-215ENST00000617482 MDM4O15151 490 aa12.19□□□□□ -0.46
C11orf54-215ENST00000617482 SLC25A27O95847 323 aa12.19□□□□□ -0.46
C11orf54-215ENST00000617482 ACADSP16219 412 aa12.19□□□□□ -0.46
C11orf54-215ENST00000617482 ADORA2AP29274 412 aa12.19□□□□□ -0.46
C11orf54-215ENST00000617482 GCKP35557 465 aa12.19□□□□□ -0.46
C11orf54-215ENST00000617482 MAGEA3P43357 314 aa12.19□□□□□ -0.46
C11orf54-215ENST00000617482 SLC34A1Q06495 639 aa12.19□□□□□ -0.46
C11orf54-215ENST00000617482 TTLL4Q14679 1199 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms