RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 MFSD10Q14728 455 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 TAF2Q6P1X5 1199 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 KIAA0319LQ8IZA0 1049 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 IKZF4Q9H2S9 585 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 GID8Q9NWU2 228 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 WWOXQ9NZC7 414 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 NINJ2Q9NZG7 142 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 SCHIP1Q9P0W5 487 aaPredicted RBP12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 TRPC5OSA6NMA1 111 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 MT-CO1P00395 513 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 CPA3P15088 417 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 CCR1P32246 355 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 SCNN1BP51168 640 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 OXCT1P55809 520 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 BEX3Q00994 111 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 CSHL1Q14406 222 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 KCNT2Q6UVM3 1135 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 GAD1Q99259 594 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 UBE2OQ9C0C9 1292 aaKnown RBP12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 VPS9D1Q9Y2B5 631 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 hCG_2014768A0A024R1R8 64 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 SPDYE5A6NIY4 337 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 DCDC2CA8MYV0 355 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 CBX4O00257 560 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 SPTLC1O15269 473 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 ALDH2P05091 517 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 KCNA3P22001 575 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 DNAJB2P25686 324 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 STX5Q13190 355 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 POLD3Q15054 466 aaPredicted RBP12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 SPDYE7PQ495Y7 208 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 CES3Q6UWW8 571 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 PTAR1Q7Z6K3 402 aaPredicted RBP12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 PGBD3Q8N328 593 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 LNX1Q8TBB1 728 aaPredicted RBP12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 ATXN3LQ9H3M9 355 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 GPAMQ9HCL2 828 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 CD248Q9HCU0 757 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 VPS28Q9UK41 221 aa12.87□□□□□ -0.35
TNFAIP3-206ENST00000612899 HMGCRP04035 888 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 FGRP09769 529 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 NQO1P15559 274 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 ITIH4Q14624 930 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 ATP13A4Q4VNC1 1196 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 GJC2Q5T442 439 aaPredicted RBP12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 DDI1Q8WTU0 396 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 HTR3CQ8WXA8 447 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 HIC2Q96JB3 615 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 NUDT5Q9UKK9 219 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 MYO1GB0I1T2 1018 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 E9PBE3 544 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 H7C4K7 107 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 RNF225M0QZC1 329 aaPredicted RBP12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 KLHL41O60662 606 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 TFE3P19532 575 aaPredicted RBP12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 DAB2P98082 770 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 BTKQ06187 659 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 CRY2Q49AN0 593 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 MARC1Q5VT66 337 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 C16orf87Q6PH81 154 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 RIOX2Q8IUF8 465 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 CARNMT1Q8N4J0 409 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 ARRDC4Q8NCT1 418 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 TCP10LQ8TDR4 215 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 TNFRSF25Q93038 417 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 TEX12Q9BXU0 123 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 GOLGA4Q13439 2230 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 USP12O75317 370 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 VPS26AO75436 327 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 CCDC130P13994 396 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 SLC6A3Q01959 620 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 BFSP2Q13515 415 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 TMEM132BQ14DG7 1078 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 RCN1Q15293 331 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 C15orf59Q2T9L4 293 aaPredicted RBP12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 TTLL9Q3SXZ7 439 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 DEFB128Q7Z7B8 93 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 CYGBQ8WWM9 190 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 MTG1Q9BT17 334 aaPredicted RBP12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 GDF3Q9NR23 364 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 RNF112Q9ULX5 631 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 FAM32AQ9Y421 112 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 NCAM2O15394 837 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 TGFB1I1O43294 461 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 AKR1A1P14550 325 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 RBL1P28749 1068 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 MARCKSL1P49006 195 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 PKN2Q16513 984 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 IRF2BP1Q8IU81 584 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 C4orf32Q8N8J7 132 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 CCDC134Q9H6E4 229 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 NMRK2Q9NPI5 230 aa12.86□□□□□ -0.35
TNFAIP3-206ENST00000612899 C5orf58C9J3I9 102 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 TSPAN3O60637 253 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 RHOCP08134 193 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 PSEN2P49810 448 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 NME5P56597 212 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 CYLC2Q14093 348 aaPredicted RBP12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 KRT72Q14CN4 511 aa12.85□□□□□ -0.35
TNFAIP3-206ENST00000612899 ARSHQ5FYA8 562 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms