RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 CLK2P49760 499 aaKnown RBP15.07■□□□□ 0
VPS36-207ENST00000611132 NSUN2Q08J23 767 aaKnown RBP eCLIP15.07■□□□□ 0
VPS36-207ENST00000611132 SPDYAQ5MJ70 313 aa15.07■□□□□ 0
VPS36-207ENST00000611132 NAPEPLDQ6IQ20 393 aa15.07■□□□□ 0
VPS36-207ENST00000611132 ARPINQ7Z6K5 226 aa15.07■□□□□ 0
VPS36-207ENST00000611132 SEPT12Q8IYM1 358 aa15.07■□□□□ 0
VPS36-207ENST00000611132 SIK2Q9H0K1 926 aa15.07■□□□□ 0
VPS36-207ENST00000611132 WDR27A2RRH5 827 aa15.06■□□□□ 0
VPS36-207ENST00000611132 ZMPSTE24O75844 475 aa15.06■□□□□ 0
VPS36-207ENST00000611132 COX4I1P13073 169 aa15.06■□□□□ 0
VPS36-207ENST00000611132 ACAP1Q15027 740 aa15.06■□□□□ 0
VPS36-207ENST00000611132 SLC35G1Q2M3R5 365 aa15.06■□□□□ 0
VPS36-207ENST00000611132 DENND1BQ6P3S1 775 aa15.06■□□□□ 0
VPS36-207ENST00000611132 ANKS1BQ7Z6G8 1248 aa15.06■□□□□ 0
VPS36-207ENST00000611132 LRRC71Q8N4P6 559 aa15.06■□□□□ 0
VPS36-207ENST00000611132 PLEKHA5Q9HAU0 1116 aa15.06■□□□□ 0
VPS36-207ENST00000611132 DMAC2Q9NW81 257 aa15.06■□□□□ 0
VPS36-207ENST00000611132 ATP11BQ9Y2G3 1177 aa15.06■□□□□ 0
VPS36-207ENST00000611132 TBC1D4O60343 1298 aa15.06■□□□□ 0
VPS36-207ENST00000611132 CHRNB2P17787 502 aa15.06■□□□□ 0
VPS36-207ENST00000611132 METTL23Q86XA0 190 aa15.06■□□□□ 0
VPS36-207ENST00000611132 PDCD6IPQ8WUM4 868 aaKnown RBP15.06■□□□□ 0
VPS36-207ENST00000611132 SLC44A1Q8WWI5 657 aa15.06■□□□□ 0
VPS36-207ENST00000611132 KIAA1257Q9ULG3 409 aa15.06■□□□□ 0
VPS36-207ENST00000611132 DCCP43146 1447 aa15.06■□□□□ 0
VPS36-207ENST00000611132 LMO7Q8WWI1 1683 aa15.06■□□□□ 0
VPS36-207ENST00000611132 KDM3BQ7LBC6 1761 aa15.06■□□□□ 0
VPS36-207ENST00000611132 A0A087WXM4 84 aa15.06■□□□□ 0
VPS36-207ENST00000611132 EME2A4GXA9 379 aaPredicted RBP15.06■□□□□ 0
VPS36-207ENST00000611132 APOA1P02647 267 aa15.06■□□□□ 0
VPS36-207ENST00000611132 CYP2F1P24903 491 aa15.06■□□□□ 0
VPS36-207ENST00000611132 RAP1GAPP47736 663 aa15.06■□□□□ 0
VPS36-207ENST00000611132 COLGALT1Q8NBJ5 622 aa15.06■□□□□ 0
VPS36-207ENST00000611132 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.06■□□□□ 0
VPS36-207ENST00000611132 TSPAN14Q8NG11 270 aa15.06■□□□□ 0
VPS36-207ENST00000611132 USP33Q8TEY7 942 aa15.06■□□□□ 0
VPS36-207ENST00000611132 FAXDC2Q96IV6 333 aa15.06■□□□□ 0
VPS36-207ENST00000611132 WRNIP1Q96S55 665 aa15.06■□□□□ 0
VPS36-207ENST00000611132 TBCBQ99426 244 aa15.06■□□□□ 0
VPS36-207ENST00000611132 NCKIPSDQ9NZQ3 722 aa15.06■□□□□ 0
VPS36-207ENST00000611132 PACSIN3Q9UKS6 424 aa15.06■□□□□ 0
VPS36-207ENST00000611132 AK5Q9Y6K8 562 aa15.06■□□□□ 0
VPS36-207ENST00000611132 DAB1O75553 588 aa15.05■□□□□ 0
VPS36-207ENST00000611132 CYP2C8P10632 490 aa15.05■□□□□ 0
VPS36-207ENST00000611132 VCLP18206 1134 aa15.05■□□□□ 0
VPS36-207ENST00000611132 HSD17B4P51659 736 aa15.05■□□□□ 0
VPS36-207ENST00000611132 FAM83EQ2M2I3 478 aa15.05■□□□□ 0
VPS36-207ENST00000611132 ZACNQ401N2 412 aa15.05■□□□□ 0
VPS36-207ENST00000611132 AGKQ53H12 422 aa15.05■□□□□ 0
VPS36-207ENST00000611132 DCAF6Q58WW2 860 aa15.05■□□□□ 0
VPS36-207ENST00000611132 KDELC2Q7Z4H8 507 aa15.05■□□□□ 0
VPS36-207ENST00000611132 CPNE8Q86YQ8 564 aa15.05■□□□□ 0
VPS36-207ENST00000611132 EFCAB3Q8N7B9 438 aa15.05■□□□□ 0
VPS36-207ENST00000611132 BHLHE22Q8NFJ8 381 aaPredicted RBP15.05■□□□□ 0
VPS36-207ENST00000611132 HELQQ8TDG4 1101 aa15.05■□□□□ 0
VPS36-207ENST00000611132 NAT14Q8WUY8 206 aa15.05■□□□□ 0
VPS36-207ENST00000611132 NKD2Q969F2 451 aaPredicted RBP15.05■□□□□ 0
VPS36-207ENST00000611132 SPATA33Q96N06 139 aa15.05■□□□□ 0
VPS36-207ENST00000611132 AP4B1Q9Y6B7 739 aa15.05■□□□□ 0
VPS36-207ENST00000611132 MYH2Q9UKX2 1941 aa15.05■□□□□ 0
VPS36-207ENST00000611132 A0A096LPK6 155 aa15.05■□□□□ 0
VPS36-207ENST00000611132 SIGLEC16A6NMB1 481 aa15.05■□□□□ 0
VPS36-207ENST00000611132 DFFAO00273 331 aa15.05■□□□□ 0
VPS36-207ENST00000611132 GYS1P13807 737 aa15.05■□□□□ 0
VPS36-207ENST00000611132 ACADSBP45954 432 aa15.05■□□□□ 0
VPS36-207ENST00000611132 DGKDQ16760 1214 aa15.05■□□□□ 0
VPS36-207ENST00000611132 ETNK2Q9NVF9 386 aa15.05■□□□□ 0
VPS36-207ENST00000611132 AP4E1Q9UPM8 1137 aa15.05■□□□□ 0
VPS36-207ENST00000611132 ACOT9Q9Y305 439 aa15.05■□□□□ 0
VPS36-207ENST00000611132 SAC3D1A6NKF1 404 aa15.05■□□□□ -0
VPS36-207ENST00000611132 PDGFRBP09619 1106 aa15.05■□□□□ -0
VPS36-207ENST00000611132 CCNA1P78396 465 aa15.05■□□□□ -0
VPS36-207ENST00000611132 NRF1Q16656 503 aa15.05■□□□□ -0
VPS36-207ENST00000611132 RNASEH2BQ5TBB1 312 aaKnown RBP15.05■□□□□ -0
VPS36-207ENST00000611132 C15orf52Q6ZUT6 534 aaKnown RBP15.05■□□□□ -0
VPS36-207ENST00000611132 FAM228AQ86W67 206 aa15.05■□□□□ -0
VPS36-207ENST00000611132 ZFPM1Q8IX07 1006 aa15.05■□□□□ -0
VPS36-207ENST00000611132 TMEM176AQ96HP8 235 aa15.05■□□□□ -0
VPS36-207ENST00000611132 C7orf26Q96N11 449 aa15.05■□□□□ -0
VPS36-207ENST00000611132 RRN3Q9NYV6 651 aa15.05■□□□□ -0
VPS36-207ENST00000611132 VTI1BQ9UEU0 232 aa15.05■□□□□ -0
VPS36-207ENST00000611132 CPSF3Q9UKF6 684 aaKnown RBP15.05■□□□□ -0
VPS36-207ENST00000611132 NRXN3Q9Y4C0 1643 aa15.05■□□□□ -0
VPS36-207ENST00000611132 SERPINB1P30740 379 aa15.05■□□□□ -0
VPS36-207ENST00000611132 GRIK3Q13003 919 aa15.05■□□□□ -0
VPS36-207ENST00000611132 KCTD21Q4G0X4 260 aa15.05■□□□□ -0
VPS36-207ENST00000611132 APOBEC3HQ6NTF7 200 aaKnown RBP15.05■□□□□ -0
VPS36-207ENST00000611132 DIS3LQ8TF46 1054 aaKnown RBP15.05■□□□□ -0
VPS36-207ENST00000611132 VPS50Q96JG6 964 aa15.05■□□□□ -0
VPS36-207ENST00000611132 ZBTB45Q96K62 511 aaPredicted RBP15.05■□□□□ -0
VPS36-207ENST00000611132 SYT15Q9BQS2 421 aa15.05■□□□□ -0
VPS36-207ENST00000611132 DDX28Q9NUL7 540 aaKnown RBP15.05■□□□□ -0
VPS36-207ENST00000611132 PLLPQ9Y342 182 aa15.05■□□□□ -0
VPS36-207ENST00000611132 TMEM191CA6NGB0 347 aa15.04■□□□□ -0
VPS36-207ENST00000611132 MPOP05164 745 aa15.04■□□□□ -0
VPS36-207ENST00000611132 SUPT20HL2P0C7V6 817 aa15.04■□□□□ -0
VPS36-207ENST00000611132 AVPR1AP37288 418 aa15.04■□□□□ -0
VPS36-207ENST00000611132 INPP1P49441 399 aa15.04■□□□□ -0
VPS36-207ENST00000611132 HMGCS2P54868 508 aa15.04■□□□□ -0
VPS36-207ENST00000611132 MED1Q15648 1581 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms