RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 NGDNQ8NEJ9 315 aaKnown RBP5.69□□□□□ -1.5
LINC00397-202ENST00000606785 SUPT20HQ8NEM7 779 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 SLC2A12Q8TD20 617 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 TBC1D22AQ8WUA7 517 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 STAMQ92783 540 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 NACC2Q96BF6 587 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 RNF31Q96EP0 1072 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 SERINC2Q96SA4 455 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 ACTRT3Q9BYD9 372 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 TPSD1Q9BZJ3 242 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 PLEKHA2Q9HB19 425 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 KCNK9Q9NPC2 374 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 RXFP3Q9NSD7 469 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 FBXO28Q9NVF7 368 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 INTS13Q9NVM9 706 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 HSF4Q9ULV5 492 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 CNPY2Q9Y2B0 182 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 UBE2J1Q9Y385 318 aaPredicted RBP5.69□□□□□ -1.5
LINC00397-202ENST00000606785 PCDHB7Q9Y5E2 793 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 DUSP10Q9Y6W6 482 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 ZNF536O15090 1300 aa5.69□□□□□ -1.5
LINC00397-202ENST00000606785 TDRD9Q8NDG6 1382 aaKnown RBP5.68□□□□□ -1.5
LINC00397-202ENST00000606785 MARCH11A6NNE9 402 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 GRXCR1A8MXD5 290 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 AHRRA9YTQ3 701 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 KIAA0355O15063 1070 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 SPTLC2O15270 562 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 PPM1DO15297 605 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 HEXIM1O94992 359 aaKnown RBP5.68□□□□□ -1.5
LINC00397-202ENST00000606785 SCAF4O95104 1147 aaKnown RBP5.68□□□□□ -1.5
LINC00397-202ENST00000606785 VNN1O95497 513 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 CHMP24386 653 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 CNR2P34972 360 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 THBS4P35443 961 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 CCR9P51686 369 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 VAV2P52735 878 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 DGKQP52824 942 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 RBM6P78332 1123 aaKnown RBP5.68□□□□□ -1.5
LINC00397-202ENST00000606785 SEMA3BQ13214 749 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 KCNJ12Q14500 433 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 ST3GAL2Q16842 350 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 AAK1Q2M2I8 961 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 SPDYE7PQ495Y7 208 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 AASDHQ4L235 1098 aaPredicted RBP5.68□□□□□ -1.5
LINC00397-202ENST00000606785 MAMDC4Q6UXC1 1216 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 SYNE3Q6ZMZ3 975 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 DTX2Q86UW9 622 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 CHD1LQ86WJ1 897 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 CIR1Q86X95 450 aaPredicted RBP5.68□□□□□ -1.5
LINC00397-202ENST00000606785 RAB11FIP4Q86YS3 637 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 ZNF808Q8N4W9 903 aaPredicted RBP5.68□□□□□ -1.5
LINC00397-202ENST00000606785 ANKRD44Q8N8A2 993 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 ZMIZ2Q8NF64 920 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 RSPRY1Q96DX4 576 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 FAM89AQ96GI7 184 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 RBM17Q96I25 401 aaKnown RBP5.68□□□□□ -1.5
LINC00397-202ENST00000606785 RSRC1Q96IZ7 334 aaKnown RBP5.68□□□□□ -1.5
LINC00397-202ENST00000606785 C20orf173Q96LM9 149 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 NRDE2Q9H7Z3 1164 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 RMI1Q9H9A7 625 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 GALNT9Q9HCQ5 603 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 TMEM74BQ9NUR3 256 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 NOX1Q9Y5S8 564 aa5.68□□□□□ -1.5
LINC00397-202ENST00000606785 TRGV11A0A075B6L2 103 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 GAGE12BA1L429 117 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 PI4KAP2A4QPH2 592 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 GAGE12HA6NDE8 117 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 MBD3L5A6NJ08 208 aaPredicted RBP5.67□□□□□ -1.5
LINC00397-202ENST00000606785 A8MVJ9 347 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 M0QYT0 321 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 GPR42O15529 346 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 HNRNPRO43390 633 aaKnown RBP5.67□□□□□ -1.5
LINC00397-202ENST00000606785 COMTP21964 271 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 TGM1P22735 817 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 POLD2P49005 469 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 FAM3BP58499 235 aaPredicted RBP5.67□□□□□ -1.5
LINC00397-202ENST00000606785 RNASELQ05823 741 aaKnown RBP5.67□□□□□ -1.5
LINC00397-202ENST00000606785 ERV3-1Q14264 604 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 MEA1Q16626 185 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 TBC1D10BQ4KMP7 808 aaPredicted RBP5.67□□□□□ -1.5
LINC00397-202ENST00000606785 CBWD5Q5RIA9 395 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 LIPMQ5VYY2 423 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 FAM205BPQ63HN1 556 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 Q6ZSN1 163 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 R3HCC1LQ7Z5L2 792 aaKnown RBP5.67□□□□□ -1.5
LINC00397-202ENST00000606785 CAND1Q86VP6 1230 aaKnown RBP5.67□□□□□ -1.5
LINC00397-202ENST00000606785 GALNT4Q8N4A0 578 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 PTGR2Q8N8N7 351 aaPredicted RBP5.67□□□□□ -1.5
LINC00397-202ENST00000606785 SYT8Q8NBV8 401 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 LINS1Q8NG48 757 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 SOCS4Q8WXH5 440 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 FAR2Q96K12 515 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 PIGSQ96S52 555 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 FUZQ9BT04 418 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 ALOXE3Q9BYJ1 711 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 GLOD4Q9HC38 313 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 NSMCE4AQ9NXX6 385 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 GPR34Q9UPC5 381 aa5.67□□□□□ -1.5
LINC00397-202ENST00000606785 ADAMTS20P59510 1910 aa5.66□□□□□ -1.5
LINC00397-202ENST00000606785 A1L4Q6 167 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms