RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 RBM41Q96IZ5 413 aaKnown RBP19.34■□□□□ 0.69
SSBP4-212ENST00000601919 CORO1BQ9BR76 489 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 MARCH2Q9P0N8 246 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 COX16Q9P0S2 106 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 CDC23Q9UJX2 597 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 TLR6Q9Y2C9 796 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 OBSL1O75147 1896 aa19.34■□□□□ 0.69
SSBP4-212ENST00000601919 MDM4O15151 490 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 IRAK2O43187 625 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 RFPL2O75678 378 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 GABRR2P28476 465 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 CCR1P32246 355 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 CXCR3P49682 368 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 EPHA5P54756 1037 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 COPS2P61201 443 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 PITX1P78337 314 aaPredicted RBP19.33■□□□□ 0.68
SSBP4-212ENST00000601919 EFEMP1Q12805 493 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 BRMS1LQ5PSV4 323 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 OTUD1Q5VV17 481 aaPredicted RBP19.33■□□□□ 0.68
SSBP4-212ENST00000601919 FAM131BQ86XD5 332 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 TMC8Q8IU68 726 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 MAP7D3Q8IWC1 876 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 EFHBQ8N7U6 833 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 CMASQ8NFW8 434 aaPredicted RBP19.33■□□□□ 0.68
SSBP4-212ENST00000601919 ALG3Q92685 438 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 NTAN1Q96AB6 310 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 PSMB7Q99436 277 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 LRRC3Q9BY71 257 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 WDCPQ9H6R7 721 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 PIDD1Q9HB75 910 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 ZNF334Q9HCZ1 680 aaPredicted RBP19.33■□□□□ 0.68
SSBP4-212ENST00000601919 PIGVQ9NUD9 493 aa19.33■□□□□ 0.68
SSBP4-212ENST00000601919 HBS1LQ9Y450 684 aaKnown RBP19.33■□□□□ 0.68
SSBP4-212ENST00000601919 CCDC195A0A1B0GUA6 201 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 ZNF197O14709 1029 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 KRT1P04264 644 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 MYL4P12829 197 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 DDX6P26196 483 aaKnown RBP eCLIP19.32■□□□□ 0.68
SSBP4-212ENST00000601919 IL1R2P27930 398 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 CXCR5P32302 372 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 PAFAH1B1P43034 410 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 MARCKSL1P49006 195 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 CKAP4Q07065 602 aaKnown RBP19.32■□□□□ 0.68
SSBP4-212ENST00000601919 KCNC3Q14003 757 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 PPP2R5DQ14738 602 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 TRIP4Q15650 581 aaPredicted RBP19.32■□□□□ 0.68
SSBP4-212ENST00000601919 WHAMMP3Q1A5X7 153 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 ARHGAP15Q53QZ3 475 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 TCEAL5Q5H9L2 206 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 EFHC2Q5JST6 749 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 ZNF697Q5TEC3 545 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 CCDC181Q5TID7 509 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 TMEM184AQ6ZMB5 413 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 PDZD4Q76G19 769 aaPredicted RBP19.32■□□□□ 0.68
SSBP4-212ENST00000601919 KCTD6Q8NC69 237 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 NAP1L3Q99457 506 aaPredicted RBP19.32■□□□□ 0.68
SSBP4-212ENST00000601919 ADAM33Q9BZ11 813 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 IGFLR1Q9H665 355 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 CCSER2Q9H7U1 834 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 IL21Q9HBE4 155 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 WDR6Q9NNW5 1121 aaKnown RBP19.32■□□□□ 0.68
SSBP4-212ENST00000601919 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.32■□□□□ 0.68
SSBP4-212ENST00000601919 SFMBT1Q9UHJ3 866 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 SLC12A6Q9UHW9 1150 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 ZMYM5Q9UJ78 669 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 RASAL2Q9UJF2 1139 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 NUDT5Q9UKK9 219 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 CHD9Q3L8U1 2897 aa19.32■□□□□ 0.68
SSBP4-212ENST00000601919 SOBPA7XYQ1 873 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 CEP104O60308 925 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 TADA3O75528 432 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 PAPLNO95428 1278 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 RARAP10276 462 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 TCF4P15884 667 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 TBX4P57082 545 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 COG7P83436 770 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 KRT81Q14533 505 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 PDK2Q15119 407 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 SMTNL2Q2TAL5 461 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 CCDC50Q8IVM0 306 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 HS6ST3Q8IZP7 471 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 SMG7Q92540 1137 aaKnown RBP19.31■□□□□ 0.68
SSBP4-212ENST00000601919 HSPH1Q92598 858 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 PEBP4Q96S96 227 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 ATXN3LQ9H3M9 355 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 PRDM12Q9H4Q4 367 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 AP4E1Q9UPM8 1137 aa19.31■□□□□ 0.68
SSBP4-212ENST00000601919 CLUHO75153 1309 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 SLC12A8A0AV02 714 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 LRRD1A4D1F6 860 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 COCHO43405 550 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 SRGAP2O75044 1071 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 OAS1P00973 400 aaKnown RBP19.3■□□□□ 0.68
SSBP4-212ENST00000601919 APOEP02649 317 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 RHOP08100 348 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 ADRA1BP35368 520 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 ZNF135P52742 658 aaPredicted RBP19.3■□□□□ 0.68
SSBP4-212ENST00000601919 ATXN1P54253 815 aaKnown RBP19.3■□□□□ 0.68
SSBP4-212ENST00000601919 RING1Q06587 406 aa19.3■□□□□ 0.68
SSBP4-212ENST00000601919 SCAPQ12770 1279 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms