RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 FBXL13Q8NEE6 735 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 GPT2Q8TD30 523 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 TAS1R2Q8TE23 839 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 FAXDC2Q96IV6 333 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 XPO6Q96QU8 1125 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 HNRNPABQ99729 332 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 SRRTQ9BXP5 876 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 DNAJC17Q9NVM6 304 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 CALCOCO1Q9P1Z2 691 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 WDR35Q9P2L0 1181 aa18.47■□□□□ 0.55
SHKBP1-203ENST00000594298 THADAQ6YHU6 1953 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 HHLA1C9JL84 531 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 NEDD8-MDP1E9PL57 170 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 ZNF217O75362 1048 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 TBX18O95935 607 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 TYRP14679 529 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 RPL6Q02878 288 aaKnown RBP18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 CETN1Q12798 172 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 DUOXA1Q1HG43 343 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 CT47A1Q5JQC4 288 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 EGFLAMQ63HQ2 1017 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 CLEC20AQ6ZU45 233 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 GPRIN1Q7Z2K8 1008 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 RABEPKQ7Z6M1 372 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 DEFB124Q8NES8 71 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 GABRG3Q99928 467 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 BBS2Q9BXC9 721 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 ADAM33Q9BZ11 813 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 SLC32A1Q9H598 525 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 CYP3A43Q9HB55 503 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 FAM49BQ9NUQ9 324 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 OSER1Q9NX31 292 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 RAB20Q9NX57 234 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 LSM7Q9UK45 103 aaKnown RBP18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 SLC6A14Q9UN76 642 aa18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 ATXN2Q99700 1313 aaKnown RBP18.46■□□□□ 0.55
SHKBP1-203ENST00000594298 IGHV1OR15-9A0A0B4J2B8 117 aa18.45■□□□□ 0.54
SHKBP1-203ENST00000594298 ZBTB24O43167 697 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-203ENST00000594298 SERPINF2P08697 491 aa18.45■□□□□ 0.54
SHKBP1-203ENST00000594298 MAPK8P45983 427 aa18.45■□□□□ 0.54
SHKBP1-203ENST00000594298 ZNF33AQ06730 810 aa18.45■□□□□ 0.54
SHKBP1-203ENST00000594298 SEMA3BQ13214 749 aa18.45■□□□□ 0.54
SHKBP1-203ENST00000594298 TPD52L1Q16890 204 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-203ENST00000594298 SPOPLQ6IQ16 392 aa18.45■□□□□ 0.54
SHKBP1-203ENST00000594298 SDE2Q6IQ49 451 aa18.45■□□□□ 0.54
SHKBP1-203ENST00000594298 PIP4P1Q86T03 277 aa18.45■□□□□ 0.54
SHKBP1-203ENST00000594298 CHPFQ8IZ52 775 aa18.45■□□□□ 0.54
SHKBP1-203ENST00000594298 TTC39CQ8N584 583 aa18.45■□□□□ 0.54
SHKBP1-203ENST00000594298 IPO4Q8TEX9 1081 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-203ENST00000594298 CAPN10Q9HC96 672 aa18.45■□□□□ 0.54
SHKBP1-203ENST00000594298 PLXND1Q9Y4D7 1925 aa18.45■□□□□ 0.54
SHKBP1-203ENST00000594298 TMEM8BA6NDV4 472 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 GFRA2O00451 464 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 CYP26A1O43174 497 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 CFIP05156 583 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 NDUFV2P19404 249 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 ERCC5P28715 1186 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 ADORA2BP29275 332 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 PLA2G4AP47712 749 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 MARSP56192 900 aaKnown RBP18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 Q6ZNB5 142 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 TPGS1Q6ZTW0 290 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 ZNF276Q8N554 614 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 SLC35C1Q96A29 364 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 CYFIP2Q96F07 1278 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 TWNKQ96RR1 684 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 ACOX2Q99424 681 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 SCNM1Q9BWG6 230 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 NT5C1AQ9BXI3 368 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 NIF3L1Q9GZT8 377 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 NMUR1Q9HB89 426 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 DNMT3LQ9UJW3 386 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 ZMIZ1Q9ULJ6 1067 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 COQ4Q9Y3A0 265 aa18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 TNRC6BQ9UPQ9 1833 aaKnown RBP18.44■□□□□ 0.54
SHKBP1-203ENST00000594298 PRRT4C9JH25 899 aa18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 PMM2O15305 246 aa18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 P4HA2O15460 535 aa18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 TOP3BO95985 862 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 CISD3P0C7P0 127 aa18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 RARGP13631 454 aa18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 SPINK2P20155 84 aa18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 ACO1P21399 889 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 WASP42768 502 aa18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 DGKGP49619 791 aa18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 PSEN1P49768 467 aa18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 GFPT1Q06210 699 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 KIAA1211LQ6NV74 962 aa18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 TOGARAM2Q6ZUX3 1019 aa18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 TADA2BQ86TJ2 420 aa18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 GATA6Q92908 595 aa18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 FAM124BQ9H5Z6 455 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 APOBEC3GQ9HC16 384 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 FBXO10Q9UK96 956 aa18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 CFAP47Q6ZTR5 3102 aa18.43■□□□□ 0.54
SHKBP1-203ENST00000594298 A0A1W2PQH9 124 aa18.42■□□□□ 0.54
SHKBP1-203ENST00000594298 FMO5P49326 533 aa18.42■□□□□ 0.54
SHKBP1-203ENST00000594298 KIF11P52732 1056 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms