RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 DQX1Q8TE96 717 aaKnown RBP11.12□□□□□ -0.63
SMAD4-214ENST00000592186 CENPIQ92674 756 aaPredicted RBP11.12□□□□□ -0.63
SMAD4-214ENST00000592186 FGF13Q92913 245 aa11.12□□□□□ -0.63
SMAD4-214ENST00000592186 ACSF2Q96CM8 615 aaPredicted RBP11.12□□□□□ -0.63
SMAD4-214ENST00000592186 DCLK3Q9C098 648 aa11.12□□□□□ -0.63
SMAD4-214ENST00000592186 RNF38Q9H0F5 515 aa11.12□□□□□ -0.63
SMAD4-214ENST00000592186 FAM204AQ9H8W3 233 aa11.12□□□□□ -0.63
SMAD4-214ENST00000592186 TDP1Q9NUW8 608 aa11.12□□□□□ -0.63
SMAD4-214ENST00000592186 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMAD4-214ENST00000592186 SLC12A6Q9UHW9 1150 aa11.12□□□□□ -0.63
SMAD4-214ENST00000592186 ARHGAP26Q9UNA1 814 aa11.12□□□□□ -0.63
SMAD4-214ENST00000592186 TLR6Q9Y2C9 796 aa11.12□□□□□ -0.63
SMAD4-214ENST00000592186 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
SMAD4-214ENST00000592186 MYO7AQ13402 2215 aa11.12□□□□□ -0.63
SMAD4-214ENST00000592186 PRRC2BQ5JSZ5 2229 aaKnown RBP11.12□□□□□ -0.63
SMAD4-214ENST00000592186 MBTPS2O43462 519 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 PROSCO94903 275 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 TBX18O95935 607 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 IGLV3-25P01717 112 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 MBL2P11226 248 aaPredicted RBP11.11□□□□□ -0.63
SMAD4-214ENST00000592186 TCF3P15923 654 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 GJA1P17302 382 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 CEBPBP17676 345 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 MSNP26038 577 aaKnown RBP11.11□□□□□ -0.63
SMAD4-214ENST00000592186 CCR1P32246 355 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 RDXP35241 583 aaKnown RBP11.11□□□□□ -0.63
SMAD4-214ENST00000592186 PCK1P35558 622 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 HARS2P49590 506 aaKnown RBP11.11□□□□□ -0.63
SMAD4-214ENST00000592186 CXCR3P49682 368 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 SULT1E1P49888 294 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 AIF1P55008 147 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 CYP4F8P98187 520 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 DEUP1Q05D60 604 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 PPP2R5DQ14738 602 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 TRIP4Q15650 581 aaPredicted RBP11.11□□□□□ -0.63
SMAD4-214ENST00000592186 CLUL1Q15846 466 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 ARL13BQ3SXY8 428 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 BRMS1LQ5PSV4 323 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 NUGGCQ68CJ6 796 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 MIB1Q86YT6 1006 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 NPAS3Q8IXF0 933 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 CCAR2Q8N163 923 aaKnown RBP11.11□□□□□ -0.63
SMAD4-214ENST00000592186 PLCD3Q8N3E9 789 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 KIAA1524Q8TCG1 905 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 SMARCD2Q92925 531 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 RNF34Q969K3 372 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 AZIN2Q96A70 460 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 CFAP57Q96MR6 1250 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 CYP2S1Q96SQ9 504 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 KLF16Q9BXK1 252 aaPredicted RBP11.11□□□□□ -0.63
SMAD4-214ENST00000592186 WDCPQ9H6R7 721 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 KIF9Q9HAQ2 790 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 TRPV4Q9HBA0 871 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 OSGEPQ9NPF4 335 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 LZTFL1Q9NQ48 299 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 DDIT4Q9NX09 232 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 OBP2AQ9NY56 170 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 RASAL2Q9UJF2 1139 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 ZNF510Q9Y2H8 683 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 NR2E1Q9Y466 385 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 DUSP10Q9Y6W6 482 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 MYO9BQ13459 2157 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 CDH23Q9H251 3354 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 PATJQ8NI35 1801 aa11.11□□□□□ -0.63
SMAD4-214ENST00000592186 SLC12A8A0AV02 714 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 MACROD2A1Z1Q3 448 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 GJB6O95452 261 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 LAMP2P13473 410 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 GBP2P32456 591 aaPredicted RBP11.1□□□□□ -0.63
SMAD4-214ENST00000592186 TBX4P57082 545 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 ATP11AP98196 1134 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 NME3Q13232 169 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 EIF4EBP2Q13542 120 aaPredicted RBP11.1□□□□□ -0.63
SMAD4-214ENST00000592186 MESDQ14696 234 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 SMAD2Q15796 467 aaKnown RBP11.1□□□□□ -0.63
SMAD4-214ENST00000592186 HADHQ16836 314 aaKnown RBP11.1□□□□□ -0.63
SMAD4-214ENST00000592186 BOLA3Q53S33 107 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 TRNP1Q6NT89 227 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 C11orf63Q6NUN7 778 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 GET4Q7L5D6 327 aaPredicted RBP11.1□□□□□ -0.63
SMAD4-214ENST00000592186 BNIPLQ7Z465 357 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 DAAM2Q86T65 1068 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 TAC4Q86UU9 113 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 ZSCAN30Q86W11 494 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 PSTKQ8IV42 348 aaKnown RBP11.1□□□□□ -0.63
SMAD4-214ENST00000592186 ARID3BQ8IVW6 561 aaPredicted RBP11.1□□□□□ -0.63
SMAD4-214ENST00000592186 REXO1L1PQ8IX06 675 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 CELF5Q8N6W0 485 aaKnown RBP11.1□□□□□ -0.63
SMAD4-214ENST00000592186 TPCN2Q8NHX9 752 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 ZSCAN18Q8TBC5 510 aaPredicted RBP11.1□□□□□ -0.63
SMAD4-214ENST00000592186 FAM172AQ8WUF8 416 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 NXPE3Q969Y0 559 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 PLD4Q96BZ4 506 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 ZSWIM3Q96MP5 696 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 ALS2CR12Q96Q35 445 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 TBCBQ99426 244 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 PHF7Q9BWX1 381 aaPredicted RBP11.1□□□□□ -0.63
SMAD4-214ENST00000592186 POMKQ9H5K3 350 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 SFMBT1Q9UHJ3 866 aa11.1□□□□□ -0.63
SMAD4-214ENST00000592186 LSM7Q9UK45 103 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms