RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 PARD6AQ9NPB6 346 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 SMC4Q9NTJ3 1288 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 KLHL11Q9NVR0 708 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 FBXO34Q9NWN3 711 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 JKAMPQ9P055 326 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 CFAP97Q9P2B7 532 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 NRBP1Q9UHY1 535 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 ZDHHC8Q9ULC8 765 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 CLCA2Q9UQC9 943 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.76□□□□□ -1.332e-7■□□□□ 10.4
HERPUD1-208ENST00000563911 FPGT-TNNI3KV9GXZ4 949 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 ROBO3Q96MS0 1386 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 USP34Q70CQ2 3546 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 PARP14Q460N5 1801 aa6.76□□□□□ -1.33
HERPUD1-208ENST00000563911 MYO9BQ13459 2157 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 PRRC2BQ5JSZ5 2229 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 ISM1B1AKI9 464 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 PI4K2BG5E9Z4 385 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 VWA5AO00534 786 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 TPD52L2O43399 206 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 FOXS1O43638 330 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 PRKAB2O43741 272 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 PRICKLE3O43900 615 aaPredicted RBP6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 FLOT1O75955 427 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 HAUS5O94927 633 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 FGBP02675 491 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 AKR1A1P14550 325 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 HK1P19367 917 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 SLC6A4P31645 630 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 PIK3CBP42338 1070 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 PSMC1P62191 440 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 CNGA2Q16280 664 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 ZFYVE27Q5T4F4 411 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 UTP14CQ5TAP6 766 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 MAMDC4Q6UXC1 1216 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 GPRIN1Q7Z2K8 1008 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 SRLQ86TD4 932 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 SGMS1Q86VZ5 419 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 GSPT2Q8IYD1 628 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 PHKBQ93100 1093 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 CPEB1Q9BZB8 566 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 UPF3AQ9H1J1 476 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 VCPKMTQ9H867 229 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 SLC28A3Q9HAS3 691 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 CORO2BQ9UQ03 480 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 TMX2Q9Y320 296 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 SLC30A1Q9Y6M5 507 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 COL11A1P12107 1806 aaPredicted RBP6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 ELP1O95163 1332 aa6.75□□□□□ -1.33
HERPUD1-208ENST00000563911 LRRC37A2A6NM11 1700 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 CDHR4A6H8M9 788 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 MYO1FO00160 1098 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 MPHOSPH10O00566 681 aaKnown RBP6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 TBX3O15119 743 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 GPR42O15529 346 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 DUSP11O75319 330 aaKnown RBP6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 BCAR3O75815 825 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 IDH1O75874 414 aaKnown RBP6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 CA3P07451 260 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 EEF2P13639 858 aaKnown RBP6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 RPL17P18621 184 aaKnown RBP6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 MGAT1P26572 445 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 CST5P28325 142 aaPredicted RBP6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 SUMO3P55854 103 aaPredicted RBP6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 PSMC6P62333 389 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 FMO1Q01740 532 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 TAP1Q03518 808 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 GPNMBQ14956 572 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 RAB30Q15771 203 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 CSRP2Q16527 193 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 TCTN1Q2MV58 587 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 TTC39AQ5SRH9 613 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 EMC10Q5UCC4 262 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 CXCL17Q6UXB2 119 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 MED25Q71SY5 747 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 POLNQ7Z5Q5 900 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 TMCO2Q7Z6W1 182 aaPredicted RBP6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 FAM186BQ8IYM0 893 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 LCORLQ8N3X6 602 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 TMEM199Q8N511 208 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 FITM2Q8N6M3 262 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 MDGA1Q8NFP4 955 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 TBC1D15Q8TC07 691 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 NUP133Q8WUM0 1156 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 SDR42E1Q8WUS8 393 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 MIEF2Q96C03 454 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 SNX27Q96L92 541 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 BTBD1Q9H0C5 482 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 NLRC4Q9NPP4 1024 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 FAM30AQ9NZY2 134 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 CPNE7Q9UBL6 633 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 SLC45A2Q9UMX9 530 aa6.74□□□□□ -1.33
HERPUD1-208ENST00000563911 A0A0U1RQG5 324 aaPredicted RBP6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 PRSS29PA6NIE9 313 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 KPNA5O15131 536 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 AGFG2O95081 481 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 SLC25A27O95847 323 aa6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 LDHAP00338 332 aaKnown RBP6.73□□□□□ -1.33
HERPUD1-208ENST00000563911 GNAI2P04899 355 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms