RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 AFF4Q9UHB7 1163 aaKnown RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ANAPC2Q9UJX6 822 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 AP2A2O94973 939 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 RPL22P35268 128 aaKnown RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 RBP5P82980 135 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 POU4F1Q01851 419 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TSPAN17Q96FV3 270 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 UGT2B28Q9BY64 529 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 GREM2Q9H772 168 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SYNGAP1Q96PV0 1343 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TPBGLP0DKB5 382 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 FDFT1P37268 417 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 AVPR1AP37288 418 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SEL1L3Q68CR1 1132 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 EFL1Q7Z2Z2 1120 aaKnown RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 BBS5Q8N3I7 341 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 APOL4Q9BPW4 351 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SAV1Q9H4B6 383 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 C12orf71A8MTZ7 269 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 DCDC2CA8MYV0 355 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 PIK3CDO00329 1044 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SERPINA6P08185 405 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 VPS72Q15906 364 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ACTRT2Q8TDY3 377 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ING5Q8WYH8 240 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SMG7Q92540 1137 aaKnown RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 NR2E1Q9Y466 385 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 MEI4A8MW99 385 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 STX7O15400 261 aaKnown RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TGM2P21980 687 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 EMC1Q8N766 993 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 CCDC115Q96NT0 180 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SLC39A3Q9BRY0 314 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SLC35C2Q9NQQ7 365 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 PSMD13Q9UNM6 376 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 DISP3Q9P2K9 1392 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ABCC8Q09428 1581 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 CSNK2BP67870 215 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 FASTKD5Q7L8L6 764 aaKnown RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ATG16L2Q8NAA4 619 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 EPB41L4BQ9H329 900 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 PCDHGC3Q9UN70 934 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SLC9A8Q9Y2E8 581 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 PLLPQ9Y342 182 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TNKSO95271 1327 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 NRP2O60462 931 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 BBOX1O75936 387 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 RBP3P10745 1247 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 DDX5P17844 614 aaKnown RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 HOXD11P31277 338 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 NPY2RP49146 381 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 GPC3P51654 580 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ABCB5Q2M3G0 1257 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 MYLK3Q32MK0 819 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 GALNTL6Q49A17 601 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 GSTCDQ8NEC7 633 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TMEM121Q9BTD3 319 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 KIF17Q9P2E2 1029 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 DENND3A2RUS2 1198 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 WFS1O76024 890 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ITGA2BP08514 1039 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 AMPD1P23109 780 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 MAP3K10Q02779 954 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 MPP2Q14168 576 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 NPTX1Q15818 432 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 DGKDQ16760 1214 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ADGRF4Q8IZF3 695 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SNX31Q8N9S9 440 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TMEM143Q96AN5 459 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ACOX2Q99424 681 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 RIBC2Q9H4K1 309 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 KRT84Q9NSB2 600 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 BIRC5O15392 142 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 CYP7B1O75881 506 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 UGT2B4P06133 528 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 PPIL2Q13356 520 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 PTK2BQ14289 1009 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 CYP4A22Q5TCH4 519 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SCUBE3Q8IX30 993 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TTLL1O95922 423 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 ADRA1DP25100 572 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 CDK16Q00536 496 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TAF13Q15543 124 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 GSTA3Q16772 222 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 FAM76BQ5HYJ3 339 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 HPS6Q86YV9 775 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 CYP4F12Q9HCS2 524 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 HMG20AQ9NP66 347 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TRMT13Q9NUP7 481 aaKnown RBP3.79□□□□□ -1.8
ATXN3-248ENST00000558190 STK36Q9NRP7 1315 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 MAGEB3O15480 346 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 TBC1D25Q3MII6 688 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 AMIGO1Q86WK6 493 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SLC52A2Q9HAB3 445 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 J3QRK9 145 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 HSPA2P54652 639 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 GIT2Q14161 759 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 SCIMPQ6UWF3 145 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 METTL23Q86XA0 190 aa3.79□□□□□ -1.8
ATXN3-248ENST00000558190 DNAJC10Q8IXB1 793 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 1050.7 ms