RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 TMTC4Q5T4D3 741 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 ADALQ6DHV7 355 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 INO80CQ6PI98 192 aaPredicted RBP6.68□□□□□ -1.34
VPS29-210ENST00000552130 RAB11FIP2Q7L804 512 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 FIBINQ8TAL6 211 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 NCSTNQ92542 709 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 RAB24Q969Q5 203 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 RMDN1Q96DB5 314 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 NEK1Q96PY6 1258 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 FUZQ9BT04 418 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 TEX12Q9BXU0 123 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 BRD8Q9H0E9 1235 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 SMARCAD1Q9H4L7 1026 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 WDCPQ9H6R7 721 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 SMURF2Q9HAU4 748 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 TDP1Q9NUW8 608 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 CORO1CQ9ULV4 474 aaPredicted RBP6.68□□□□□ -1.34
VPS29-210ENST00000552130 EXOC7Q9UPT5 735 aa6.68□□□□□ -1.34
VPS29-210ENST00000552130 SPAG9O60271 1321 aaKnown RBP6.68□□□□□ -1.34
VPS29-210ENST00000552130 A0A087WZ62 844 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 GPR75-ASB3A0A0A6YYF3 556 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 UBA6A0AVT1 1052 aaPredicted RBP6.67□□□□□ -1.34
VPS29-210ENST00000552130 STX16-NPEPL1H3BU86 382 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 K7ESM1 405 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 BTN3A1O00481 513 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 STX16O14662 325 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 WDR46O15213 610 aaKnown RBP6.67□□□□□ -1.34
VPS29-210ENST00000552130 TP73O15350 636 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 KLK10O43240 276 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 SRGAP3O43295 1099 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 HNRNPRO43390 633 aaKnown RBP6.67□□□□□ -1.34
VPS29-210ENST00000552130 STX6O43752 255 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 TOP1P11387 765 aaKnown RBP6.67□□□□□ -1.34
VPS29-210ENST00000552130 TNFRSF1AP19438 455 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 CCNCP24863 283 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 NFKBIAP25963 317 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 GARSP41250 739 aaKnown RBP6.67□□□□□ -1.34
VPS29-210ENST00000552130 CAPZA2P47755 286 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 IFNAR2P48551 515 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 ATP8B2P98198 1209 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 CDC42EP1Q00587 391 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 CAMK2DQ13557 499 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 NOMO1Q15155 1222 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 GEN1Q17RS7 908 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 PRICKLE4Q2TBC4 344 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 SLC44A4Q53GD3 710 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 KRBOX4Q5JUW0 171 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 ANO7Q6IWH7 933 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 ARHGEF18Q6ZSZ5 1173 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 PPP1R3BQ86XI6 285 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 TUSC5Q8IXB3 177 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 NLGN4XQ8N0W4 816 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 POGLUT1Q8NBL1 392 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 KIAA1524Q8TCG1 905 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 CPT1CQ8TCG5 803 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 CFHR4Q92496 578 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 STAMQ92783 540 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 C3orf49Q96BT1 292 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 TUBGCP5Q96RT8 1024 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 FDXACB1Q9BRP7 624 aaPredicted RBP6.67□□□□□ -1.34
VPS29-210ENST00000552130 CHST8Q9H2A9 424 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 MROH8Q9H579 483 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 TASP1Q9H6P5 420 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 NRIP3Q9NQ35 241 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 AP5S1Q9NUS5 200 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 ZMAT5Q9UDW3 170 aaKnown RBP6.67□□□□□ -1.34
VPS29-210ENST00000552130 SRRDQ9UH36 339 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 CPSF3Q9UKF6 684 aaKnown RBP6.67□□□□□ -1.34
VPS29-210ENST00000552130 DAPP1Q9UN19 280 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 PLA2G2DQ9UNK4 145 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 POMT1Q9Y6A1 747 aa6.67□□□□□ -1.34
VPS29-210ENST00000552130 EIF4G1Q04637 1599 aaKnown RBP6.66□□□□□ -1.34
VPS29-210ENST00000552130 A4D1N5 150 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 H7BY64 318 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 FOXP2O15409 715 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 COQ9O75208 318 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 GLP2RO95838 553 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 ATF2P15336 505 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 KCNA5P22460 613 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 HSPA1LP34931 641 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 MAGEA10P43363 369 aaPredicted RBP6.66□□□□□ -1.34
VPS29-210ENST00000552130 LMAN1P49257 510 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 NT5C2P49902 561 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 HNMTP50135 292 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 ALDH18A1P54886 795 aaKnown RBP6.66□□□□□ -1.34
VPS29-210ENST00000552130 MAN2A1Q16706 1144 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 CAVIN4Q5BKX8 364 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 TTC38Q5R3I4 469 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 MPP7Q5T2T1 576 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 KRT80Q6KB66 452 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 KIAA1841Q6NSI8 718 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 CHST3Q7LGC8 479 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 NLRP10Q86W26 655 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 PEX5LQ8IYB4 626 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 HDDC3Q8N4P3 179 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 FRMD1Q8N878 549 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 GLB1L3Q8NCI6 653 aaPredicted RBP6.66□□□□□ -1.34
VPS29-210ENST00000552130 SMCR8Q8TEV9 937 aaPredicted RBP6.66□□□□□ -1.34
VPS29-210ENST00000552130 FAM216AQ8WUB2 273 aa6.66□□□□□ -1.34
VPS29-210ENST00000552130 RSC1A1Q92681 617 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms