RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 PPM1KQ8N3J5 372 aa9.81□□□□□ -0.84
YBX3-218ENST00000546298 PIP4P2Q8N4L2 257 aa9.81□□□□□ -0.84
YBX3-218ENST00000546298 TRIML1Q8N9V2 468 aa9.81□□□□□ -0.84
YBX3-218ENST00000546298 KCTD13Q8WZ19 329 aa9.81□□□□□ -0.84
YBX3-218ENST00000546298 PLD4Q96BZ4 506 aa9.81□□□□□ -0.84
YBX3-218ENST00000546298 ULBP1Q9BZM6 244 aa9.81□□□□□ -0.84
YBX3-218ENST00000546298 CNGB3Q9NQW8 809 aa9.81□□□□□ -0.84
YBX3-218ENST00000546298 SLC27A6Q9Y2P4 619 aa9.81□□□□□ -0.84
YBX3-218ENST00000546298 HBS1LQ9Y450 684 aaKnown RBP9.81□□□□□ -0.84
YBX3-218ENST00000546298 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.81□□□□□ -0.84
YBX3-218ENST00000546298 CEP250Q9BV73 2442 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 ANTXRLA6NF34 631 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 BIN1O00499 593 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 KHNYNO15037 678 aaKnown RBP9.8□□□□□ -0.84
YBX3-218ENST00000546298 ZNF217O75362 1048 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 PENKP01210 267 aaPredicted RBP9.8□□□□□ -0.84
YBX3-218ENST00000546298 KLKB1P03952 638 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 HMBSP08397 361 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 GCNT1Q02742 428 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 ADIGQ0VDE8 80 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 CCDC6Q16204 474 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 PPM1JQ5JR12 505 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 STPG1Q5TH74 334 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 BSPRYQ5W0U4 402 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 RNF43Q68DV7 783 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 SLC36A4Q6YBV0 504 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 DENND1CQ8IV53 801 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 CPXM2Q8N436 756 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 UBR7Q8N806 425 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 EHBP1Q8NDI1 1231 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 UBA3Q8TBC4 463 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 RLN3Q8WXF3 142 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 GOLGA1Q92805 767 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 HSFY1Q96LI6 401 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 SLC2A11Q9BYW1 496 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 ABCC13Q9NSE7 274 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 PLK2Q9NYY3 685 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 FBXO10Q9UK96 956 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 AGO1Q9UL18 857 aaKnown RBP9.8□□□□□ -0.84
YBX3-218ENST00000546298 CTNND2Q9UQB3 1225 aa9.8□□□□□ -0.84
YBX3-218ENST00000546298 KIF26AQ9ULI4 1882 aaPredicted RBP9.79□□□□□ -0.84
YBX3-218ENST00000546298 PRRT4C9JH25 899 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 TULP2O00295 520 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 TRIM24O15164 1050 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 SART1O43290 800 aaKnown RBP9.79□□□□□ -0.84
YBX3-218ENST00000546298 AP5Z1O43299 807 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 TIMM44O43615 452 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 GADD45BO75293 160 aaPredicted RBP9.79□□□□□ -0.84
YBX3-218ENST00000546298 FBXO21O94952 628 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 LATS1O95835 1130 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 AFPP02771 609 aaKnown RBP9.79□□□□□ -0.84
YBX3-218ENST00000546298 LCP1P13796 627 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 BCKDHBP21953 392 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 BMP6P22004 513 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 WASP42768 502 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 ZNF132P52740 706 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 MARSP56192 900 aaKnown RBP9.79□□□□□ -0.84
YBX3-218ENST00000546298 STX17P56962 302 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 KCNH2Q12809 1159 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 STARD3Q14849 445 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 TRIP4Q15650 581 aaPredicted RBP9.79□□□□□ -0.84
YBX3-218ENST00000546298 MAP7D1Q3KQU3 841 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 PKDCCQ504Y2 493 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 MPPE1Q53F39 396 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 DAB2IPQ5VWQ8 1189 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 EGFLAMQ63HQ2 1017 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 TRIM59Q8IWR1 403 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 RBBP8NLQ8NC74 664 aaPredicted RBP9.79□□□□□ -0.84
YBX3-218ENST00000546298 LMO3Q8TAP4 145 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 IPO4Q8TEX9 1081 aaKnown RBP9.79□□□□□ -0.84
YBX3-218ENST00000546298 DDI1Q8WTU0 396 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 SLC35F5Q8WV83 523 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 IRGQQ8WZA9 623 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 TFAP2BQ92481 460 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 PIGKQ92643 395 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 BHMTQ93088 406 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 FAM81BQ96LP2 452 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 GABRG3Q99928 467 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 EDEM2Q9BV94 578 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 SRRTQ9BXP5 876 aaKnown RBP9.79□□□□□ -0.84
YBX3-218ENST00000546298 IRX2Q9BZI1 471 aaPredicted RBP9.79□□□□□ -0.84
YBX3-218ENST00000546298 ZDHHC4Q9NPG8 344 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.79□□□□□ -0.84
YBX3-218ENST00000546298 WDFY4Q6ZS81 3184 aa9.79□□□□□ -0.84
YBX3-218ENST00000546298 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.78□□□□□ -0.84
YBX3-218ENST00000546298 A0A1W2PQF6 199 aa9.78□□□□□ -0.84
YBX3-218ENST00000546298 YJEFN3A6XGL0 299 aa9.78□□□□□ -0.84
YBX3-218ENST00000546298 E7ENQ6 273 aa9.78□□□□□ -0.84
YBX3-218ENST00000546298 M0QYV0 167 aa9.78□□□□□ -0.84
YBX3-218ENST00000546298 ADRB1P08588 477 aa9.78□□□□□ -0.84
YBX3-218ENST00000546298 GABRG2P18507 467 aa9.78□□□□□ -0.84
YBX3-218ENST00000546298 HOXD12P35452 270 aa9.78□□□□□ -0.84
YBX3-218ENST00000546298 ACADSBP45954 432 aa9.78□□□□□ -0.84
YBX3-218ENST00000546298 RGS7P49802 495 aa9.78□□□□□ -0.84
YBX3-218ENST00000546298 MFAP3P55082 362 aa9.78□□□□□ -0.84
YBX3-218ENST00000546298 DAOAP59103 153 aa9.78□□□□□ -0.84
YBX3-218ENST00000546298 UBE2HP62256 183 aa9.78□□□□□ -0.84
YBX3-218ENST00000546298 LMAN2Q12907 356 aa9.78□□□□□ -0.84
YBX3-218ENST00000546298 EIF4HQ15056 248 aaKnown RBP9.78□□□□□ -0.84
YBX3-218ENST00000546298 FYB2Q5VWT5 728 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms